| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0233 |
|---|
| Symbol | |
|---|
| ID | 5170856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 227212 |
|---|
| End bp | 227478 |
|---|
| Gene Length | 267 bp |
|---|
| Protein Length | 88 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640562736 |
|---|
| Product | flagellar biosynthetic protein FliQ |
|---|
| Protein accession | YP_001243838 |
|---|
| Protein GI | 148269378 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1987] Flagellar biosynthesis pathway, component FliQ |
|---|
| TIGRFAM ID | [TIGR01402] flagellar biosynthetic protein FliQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCATTG AGGTCTTTCT GGATATAATG AAAAGCGGAA TAAGTCTTCT GCTGGAGATC
ATCGTACCAC CCCTCGTTGT GAGTCTCATC GTGGGGCTTG TGATCAGCAT CTTTCAGGCC
GTCACTCAAA TCCATGAGCA GACGCTGATG TTCGCTCCAA GAATAATTGT GCTGTTTCTC
ACGATCCTGT TTCTGAGCGG CTGGATGGCG CAGAAAATCC TCGACTTCTT CAGTGAAATG
CTTCAGAAGT ACTTCCAGAT GATCTGA
|
|---|
| Protein sequence | MTIEVFLDIM KSGISLLLEI IVPPLVVSLI VGLVISIFQA VTQIHEQTLM FAPRIIVLFL
TILFLSGWMA QKILDFFSEM LQKYFQMI
|
|---|
| |