| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0177 |
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| Symbol | |
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| ID | 5170775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 172378 |
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| End bp | 173793 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640562678 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001243782 |
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| Protein GI | 148269322 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCT CCATCATCGG AGCAGGAAGT GTGAGGTTCG CACTTCAGCT TGTGGGAGAC
ATCGCTCAGA CGGAGGAACT TTCAAGGGAA GATACACACA TCTACATGAT GGACGTTCAC
GAAAGAAGAC TGAACGCATC TTACATCCTC GCAAGAAAGT ACGTGGAAGA GCTGAACTCT
CCTGTGAAGA TCGTAAAAAC ATCCAGTCTG GATGAAGCCA TAGATGGAGC AGACTTCATC
ATAAACACCG CCTATCCTTA CGATCCGAGG TACCACGACA GCGGCTCTCA AAGATGGGAC
GAGGTCACAA AGGTCGGTGA AAAACACGGC TACTACAGAG GAATAGACAG TCAAGAGCTG
AACATGGTTT CCACTTACAC CTACGTTCTT TCTTCTTATC CCGACATGAA GCTCGCCCTC
GAGATAGCGG AGAAGATGAA AAAGATGGCA CCCAAAGCGT ACTTGATGCA GACGGCAAAT
CCCGTCTTCG AGATCACGCA GGCGGTGAGA AGGTGGACTG GTGCGAACAT AGTGGGGTTC
TGCCACGGTG TTGCCGGGGT TTATGAAGTC TTCGAAAAAC TCGACCTCGA TCCGGAAGAG
GTAGACTGGC AGGTCGCCGG GGTGAACCAC GGTATCTGGC TGAACAGGTT CAGATACAGA
GGAGAAGATG CATACCCGCT TCTTGACGAG TGGATAGAGA AGAAGCTACC AGAGTGGGAG
CCGAAGAACC CATGGGACAC ACAGATGTCT CCTGCCGCGA TGGATATGTA CAAATTTTAC
GGTATGCTTC CGATAGGTGA CACCGTGAGG AACGGCAGCT GGAAGTACCA CTACAACCTG
GAGACGAAGA AGAAGTGGTT TGGAAAGTTC GGCGGTATAG ACAACGAAGT GGAAAGACCG
AAATTCCACG AGCAACTCAG AAGAGCAAGA GAGCGCCTCA TAAAACTCGC AGAAGAGGTT
CAGCAAAACC CAGGTATGAA ACTCACAGAG GAACATCCCG AGATCTTCCC GAAAGGAAAA
CTCAGCGGAG AACAGCACAT TCCTTTCATC AACGCGATAG CGAACAACAA ACGTGTGAGG
CTCTTTCTGA ACGTGGAGAA CCAGGGAACA CTCAAAGACT TTCCCGATGA TGTCGTGATG
GAACTTCCCG TCTGGGTGGA CTGCTGTGGA ATCCACAGAG AGAAAGTGGA ACCCGATCTC
ACCCACCGGA TAAAGATCTT CTATCTGTGG CCCAGGATTC TGAGAATGGA GTGGAACTTA
GAAGCATACA TCTCGAGGGA CAGAAAGGTG CTCGAAGAAA TCCTCATCAG AGATCCAAGG
ACAAAATCCT ACGAGCAGAT CGTGCAAGTG CTCGATGAGA TCTTCAACCT GCCGTTCAAC
GAAGAGTTGA GGAGATACTA CAAAGAGAAA CTCTGA
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| Protein sequence | MKISIIGAGS VRFALQLVGD IAQTEELSRE DTHIYMMDVH ERRLNASYIL ARKYVEELNS
PVKIVKTSSL DEAIDGADFI INTAYPYDPR YHDSGSQRWD EVTKVGEKHG YYRGIDSQEL
NMVSTYTYVL SSYPDMKLAL EIAEKMKKMA PKAYLMQTAN PVFEITQAVR RWTGANIVGF
CHGVAGVYEV FEKLDLDPEE VDWQVAGVNH GIWLNRFRYR GEDAYPLLDE WIEKKLPEWE
PKNPWDTQMS PAAMDMYKFY GMLPIGDTVR NGSWKYHYNL ETKKKWFGKF GGIDNEVERP
KFHEQLRRAR ERLIKLAEEV QQNPGMKLTE EHPEIFPKGK LSGEQHIPFI NAIANNKRVR
LFLNVENQGT LKDFPDDVVM ELPVWVDCCG IHREKVEPDL THRIKIFYLW PRILRMEWNL
EAYISRDRKV LEEILIRDPR TKSYEQIVQV LDEIFNLPFN EELRRYYKEK L
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