Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0111 |
Symbol | |
ID | 5171162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 105075 |
End bp | 105503 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640562612 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001243716 |
Protein GI | 148269256 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.238503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGCTC TGGAGATATT CAAAACACTC TTTTCGCTGG TGATGAGGTT TTCCAGTTAT CTTCCATCGA ACGAAGAGAT CTCTGACATG AAAACAACGG AGCTCTACGC GTTCCTCTAC GTGGCTCTCT TCGGTCCAAA AAAGATGAAG GAGATAGCGG AGTTTCTTTC CACAACGAAG AGCAACGTAA CGAACGTGGT GGATTCTCTG GAGAAAAGAG GCCTGGTCGT CAGAGAGATG GACCCTGTTG ATAGAAGAAC GTACCGGGTG GTCTTGACCG AAAAGGGAAA GAAAATCTTC GAAGAGATTC TTTCGAACTT CGAAAGTCTT TTGAAAAGTG TTCTTGAGAA ATTTTCCGAG GAAGATCTCA AAGTGGTGAG CGAAGGATTC AATCGAATGG TGGAAGCCTT GTCGAGGGAG GGAAGGTAG
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Protein sequence | MDALEIFKTL FSLVMRFSSY LPSNEEISDM KTTELYAFLY VALFGPKKMK EIAEFLSTTK SNVTNVVDSL EKRGLVVREM DPVDRRTYRV VLTEKGKKIF EEILSNFESL LKSVLEKFSE EDLKVVSEGF NRMVEALSRE GR
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