Gene BBta_7784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7784 
Symbol 
ID5150748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp8170313 
End bp8170966 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content58% 
IMG OID640562413 
Productputative osmotically inducible protein Y precursor 
Protein accessionYP_001243520 
Protein GI148258935 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0602659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.220051 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGATG ACCGCGAGGT TAAACGGGAC GTCGAGGAAG AACTTCGGTG GGATCCGGCC 
ATCGAAGCAA CAGACATCGC GGTTGCGGTC AAAGATGGCG TTGTGACGCT CACGGGCTTT
GTGCGAAGCT ACAATGAAAA GCTGGAAGCT GAAGTGGCAG CGAAGCGCGT AACAGGCGTC
CATGCAGTCG CCAATGATAT CGAGGTGCGA TTGCCGAGCA TCACGGAGAG GCCTGATCCG
GAAATCGCCC GGGATGCCGT CGCGGCAATC AAGGCTCAAC TGCCGGGTTC CTGGGAGAAC
ATCAAGATTG TCGTAAAGGC GGGCTGGGTC ACACTCGAAG GTGAGGTCAG GTGGGATTAC
CAACGAAGCA TTGCGGCGAA CTCAATCCGC CGGTTGCGCG GCGTCAAGGG CATAAGCAAC
CTGATCACGC TGAAGGGCAA CATCGCTCCC AAGGAGGTGA AAAGACGCAT TGTTTCCGCG
CTACACAGGA GTGCCCAGGT CGATGCTGAG CGCATTACGG TCGATACAAG CGGAAGCAAG
GTCGTTCTCA GAGGTACTGT TCGTTCCTGG GCGGAGCGAG AGGAAGCAGA ACGAGCCGCG
TGGGCCGCTC CGGCAGTTAC CGACGTCGAA AACCACATCA CGGTTAGCAA TTAA
 
Protein sequence
MRDDREVKRD VEEELRWDPA IEATDIAVAV KDGVVTLTGF VRSYNEKLEA EVAAKRVTGV 
HAVANDIEVR LPSITERPDP EIARDAVAAI KAQLPGSWEN IKIVVKAGWV TLEGEVRWDY
QRSIAANSIR RLRGVKGISN LITLKGNIAP KEVKRRIVSA LHRSAQVDAE RITVDTSGSK
VVLRGTVRSW AEREEAERAA WAAPAVTDVE NHITVSN