| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7782 |
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| Symbol | |
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| ID | 5150746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 8168179 |
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| End bp | 8169234 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640562411 |
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| Product | putative ATP-dependent DNA ligase |
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| Protein accession | YP_001243518 |
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| Protein GI | 148258933 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.089551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.119022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTCA TTCCTGGTGA GCACGGGCGC TGCCGCTGCA TAGGATTAGA TGTCATGGCA
GGCATGCTTT CGGCCGCGCT ACCTGAAGAG GTAAGGACCG GGGCACGCAA GAGGCGGCAA
CCAAGTTGGA TAGCGCCGAT GCTGGCGAGC TTGACGCAAG AGCGATTTTC CAGGGAGGAC
TGGCTCTTCG AACCGAAATG GGACGGCGAG CGCTGCCTGG TGTTCAGTCA CGGCACCGAA
TTGGAATTGT TGTCACGTAA CAGGACACGT CTGAATGAAA GATATCCCGA GCTTGCACCG
GCATTCAATC AGTGTGCGAT GAACTCTTTC ATTGCTGATG GTGAAATCGT TGCATTCACG
GGCGGCATAA CGAGCTTCAT GCAGCTCCAA AAGCGCATGC AGGTCGAGAA TCCATCTCGC
TCCTTGTTGC GACAGGTGCC GGTCTATATG TACCTGTTCG ACCTTCTGTA CTGGAACGGT
TACGATTTGC GGCGCGTACC CCTTCGGCAT CGTAAAGCAC TGCTTCACGA CGCATTCCCA
TTCGGGCGCC GATTGAGATT CACCGCGCAT CGTGAGAAGG ATGGCGAAGC CTATTACCGC
GAAGCGTGCC GCAAGGGCTG GGAAGGGATT ATCGCTAAGA ATGGCAACAG CCAATATGTC
TCAAAACGAA CGCGAGACTG GCTGAAGTTC AAGTGTGAGC AAGGTCAGGA GTTTGTTGTC
GGCGGATACA CAGAGCCCCA GGGACATCGG ATTGGCTTCG GGGATTTGCT GCTAGGAGTG
TACCGAGACG AGCGACTTCA TTATGCGGGA AAGGTTGGAA CCGGATTCGA TAGCGCGATG
TTGAAAGTTC TTGCGCAGCG ACTTCGAAGT ATCGAAACGA ATGTCTCGCC ATTTGCCGAC
TACGATATCC CGCAACGAGG CGTCTACTGG GTCAAACCGG AGCTCGTCGC ACAGATTGCC
TTCACGGAAT GGACCAAGGA TGGCCGGCTC CGCCATCCAC GGTTTCGCGG TTTGCGTGAC
GACAAGCTGC CGTCAGAAGT GATACGGGAG GGTTGA
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| Protein sequence | MQLIPGEHGR CRCIGLDVMA GMLSAALPEE VRTGARKRRQ PSWIAPMLAS LTQERFSRED
WLFEPKWDGE RCLVFSHGTE LELLSRNRTR LNERYPELAP AFNQCAMNSF IADGEIVAFT
GGITSFMQLQ KRMQVENPSR SLLRQVPVYM YLFDLLYWNG YDLRRVPLRH RKALLHDAFP
FGRRLRFTAH REKDGEAYYR EACRKGWEGI IAKNGNSQYV SKRTRDWLKF KCEQGQEFVV
GGYTEPQGHR IGFGDLLLGV YRDERLHYAG KVGTGFDSAM LKVLAQRLRS IETNVSPFAD
YDIPQRGVYW VKPELVAQIA FTEWTKDGRL RHPRFRGLRD DKLPSEVIRE G
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