Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_7779 |
Symbol | |
ID | 5149696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 8165665 |
End bp | 8166393 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640562409 |
Product | putative UspA |
Protein accession | YP_001243516 |
Protein GI | 148258931 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0208146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.10666 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTTTTTA GCGTATTACC TCCACCTCCA GCACCCATTG AAGGCGACCT CACAGGCGCA CTTGGCATCG CGGCCCTGAT GGATCAGGCG CGTGCCTCAG GCGATAAAAT GGAAAAGACC ATTGTCGACC GGTTAAAGCG GTACGGCGTG GCCATCGAGC TTCGCAGGTT CGACGTTCTA AGATCAGACA TTGCAGATGT TGCCGCTCGC GAAGCGAGGT GCGCCGACGC CTTCGTCTTG ATCAGACCAA ACGGCTCGCA AGATCCCGAT CGCCTCGTCG AGGGCATTCT GTTTGGATCA GGCCGGCATA TTTTGTTGGT CCCCGAAGTC GAGCGCCCGA AATCCATTGT TTTCAACCGG ATTTTGGTCG CGTGGAACGC GAGCCGCGAA TCGACGCGGG CTGTGGCCGA AGCAATGCCC TATTTGCGGA TAGCGAAGGA CGTCTCGGTC GTGATGGTTA CCGAAGAGCC TCGCAAACAG ATGGAAGGAT CCGTGGGTGA CGCGATCAAA AAGCATTTGA AGCATCACGG CGTTGCGGCG GAACTCCATC GGGTCAAATG CCGGAACGGT AATGTAGGCG AAACATTGCT TGCGGAAGCC AAGAAAGCGA GAAGTGACCT GATCGTTCTA GGTGGATACG GCCATACTCG CCTTCGCGAG ATGCTTCTCG GCGGTGTAAC CTATCATTTG ATGCACAATT CGCCGGTGCC GCTTCTCATG GCGCACTAA
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Protein sequence | MFFSVLPPPP APIEGDLTGA LGIAALMDQA RASGDKMEKT IVDRLKRYGV AIELRRFDVL RSDIADVAAR EARCADAFVL IRPNGSQDPD RLVEGILFGS GRHILLVPEV ERPKSIVFNR ILVAWNASRE STRAVAEAMP YLRIAKDVSV VMVTEEPRKQ MEGSVGDAIK KHLKHHGVAA ELHRVKCRNG NVGETLLAEA KKARSDLIVL GGYGHTRLRE MLLGGVTYHL MHNSPVPLLM AH
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