Gene BBta_7779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7779 
Symbol 
ID5149696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp8165665 
End bp8166393 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content56% 
IMG OID640562409 
Productputative UspA 
Protein accessionYP_001243516 
Protein GI148258931 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0208146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.10666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTTTTA GCGTATTACC TCCACCTCCA GCACCCATTG AAGGCGACCT CACAGGCGCA 
CTTGGCATCG CGGCCCTGAT GGATCAGGCG CGTGCCTCAG GCGATAAAAT GGAAAAGACC
ATTGTCGACC GGTTAAAGCG GTACGGCGTG GCCATCGAGC TTCGCAGGTT CGACGTTCTA
AGATCAGACA TTGCAGATGT TGCCGCTCGC GAAGCGAGGT GCGCCGACGC CTTCGTCTTG
ATCAGACCAA ACGGCTCGCA AGATCCCGAT CGCCTCGTCG AGGGCATTCT GTTTGGATCA
GGCCGGCATA TTTTGTTGGT CCCCGAAGTC GAGCGCCCGA AATCCATTGT TTTCAACCGG
ATTTTGGTCG CGTGGAACGC GAGCCGCGAA TCGACGCGGG CTGTGGCCGA AGCAATGCCC
TATTTGCGGA TAGCGAAGGA CGTCTCGGTC GTGATGGTTA CCGAAGAGCC TCGCAAACAG
ATGGAAGGAT CCGTGGGTGA CGCGATCAAA AAGCATTTGA AGCATCACGG CGTTGCGGCG
GAACTCCATC GGGTCAAATG CCGGAACGGT AATGTAGGCG AAACATTGCT TGCGGAAGCC
AAGAAAGCGA GAAGTGACCT GATCGTTCTA GGTGGATACG GCCATACTCG CCTTCGCGAG
ATGCTTCTCG GCGGTGTAAC CTATCATTTG ATGCACAATT CGCCGGTGCC GCTTCTCATG
GCGCACTAA
 
Protein sequence
MFFSVLPPPP APIEGDLTGA LGIAALMDQA RASGDKMEKT IVDRLKRYGV AIELRRFDVL 
RSDIADVAAR EARCADAFVL IRPNGSQDPD RLVEGILFGS GRHILLVPEV ERPKSIVFNR
ILVAWNASRE STRAVAEAMP YLRIAKDVSV VMVTEEPRKQ MEGSVGDAIK KHLKHHGVAA
ELHRVKCRNG NVGETLLAEA KKARSDLIVL GGYGHTRLRE MLLGGVTYHL MHNSPVPLLM
AH