| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7446 |
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| Symbol | |
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| ID | 5151515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 7820700 |
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| End bp | 7821962 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640562102 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | YP_001243211 |
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| Protein GI | 148258626 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.230538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGGCA CGGGAGTCAT CGACAATTTC CTGGGCACCT TCACCCAGTA TATCGATTCC
GGCTTCGGCC TCGTTCAAGG TGACGTGCGC TGGCTCGCCA GCGTCCTCAT CGCCATCGAC
ATCACGCTGG CGGGGCTCTT CTGGGCGATG GCGCCCGACG AGGACGTGCT CGCGCGCCTG
ATCCGCAAGA CGCTCTATAT CGGCCTCTTC GCCTTCATCA TCGGCAACTA CAACAATCTC
GCGCAGATCA TCTACAACAG CTTCGCCGGC CTCGGGATCA AGGCCGGTGG CGGCACGATG
AGCGCTGCGC AGCTCCTGCA GCCCGGCAAG ATCGCCGAGG TCGGGATCGA TGCCGGCAAG
CCGATCCTCA CCGCCATCTC CGGTATGATG GGCTTCACCA GCGTCTTCGC CAATCTGGTG
CAGATCGTCA TTCTTCTGGT CGCGTGGCTG ATCGTCGTCA TCAGCTTCTT CGTCATGGCG
ATCCAGCTCT TTGTGAGTTT GATCGAGTTC AAGCTGACGA CGTTGGCCGG TTTCGTACTC
GTGCCGTTCG GGCTCTTCGG CCGTACGGCC TTCCTCGCCG AACGGGTGCT GGGCAACGTG
GTGTCCAGCG GGATCAAGAT TCTCGTGCTC GCCGTCATCA TCGGCATCGG CTCCACGATC
TTCAATCAAT TCACCAGCGG CTTCAACAAT CCGCCGACAA TTTCCGACGC GCTGACGCTG
ATCCTCGCAG CGCTCTCGCT CCTTGGCCTC ACGATCTTCG GTCCAGGCAT CGCCAATGGC
CTGATCGCGG GCGGACCGCA GCTCGGCGCC GGCGCGGCTG TCGCGACAGG ATTGGGAGCG
GCCGGGATCG GAGCGGCCGG CATTGCGGCG ACCGCCGGGG GTGTCGCCGC GGCCGGCGGC
GCGATCGCCG GGACGGCGCG CGCGGGAGCC GCGGTCGCGG GCGGCGCCAG CGCCGCATAT
CGCGCGGGTG GGGCAGCGGG TGTCGCCCAA GCTGCCGGCT CAGTCGCCAT GAGCCCACTG
CGCCGCGCCG CCAGCAGCCT TCAAGAAAGC TTCGCCTCTG GCGAGCGTGC CGTCATGAGC
GGCGGCGCGC GCTCGTCGTC ATCCGCCGGC GCGTCCGCCG CGTCGGACAG CCCGCCAGCA
TGGGCCCAGC GCATGAAGCG CGGCCAGACC ATCAACCGCG GCGTCACCGC CGCCGACCAC
GCAATCCGCT CCGGTGATCG GGCAAGCGGC GGGCATCAGG TCGATCTTTC CGAGGGGGAA
TAG
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| Protein sequence | MGGTGVIDNF LGTFTQYIDS GFGLVQGDVR WLASVLIAID ITLAGLFWAM APDEDVLARL
IRKTLYIGLF AFIIGNYNNL AQIIYNSFAG LGIKAGGGTM SAAQLLQPGK IAEVGIDAGK
PILTAISGMM GFTSVFANLV QIVILLVAWL IVVISFFVMA IQLFVSLIEF KLTTLAGFVL
VPFGLFGRTA FLAERVLGNV VSSGIKILVL AVIIGIGSTI FNQFTSGFNN PPTISDALTL
ILAALSLLGL TIFGPGIANG LIAGGPQLGA GAAVATGLGA AGIGAAGIAA TAGGVAAAGG
AIAGTARAGA AVAGGASAAY RAGGAAGVAQ AAGSVAMSPL RRAASSLQES FASGERAVMS
GGARSSSSAG ASAASDSPPA WAQRMKRGQT INRGVTAADH AIRSGDRASG GHQVDLSEGE
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