Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_7317 |
Symbol | |
ID | 5155240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 7682732 |
End bp | 7685488 |
Gene Length | 2757 bp |
Protein Length | 918 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640561977 |
Product | putative ATP-dependent exoDNAse |
Protein accession | YP_001243088 |
Protein GI | 148258503 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCTCGA TTCTGGAGAC CGCGTCAGTG GTTGCAACGT GGAATGTTGC GGCGTCCAGC GCCTATTATG TGCGCGGCGC CGAATACTAT CTTGGCAGCC GAGAGCCGGA GGGCGTCTGG TATGCGCCGC GCGGCGACCT CGGCCGGCGG GATGCAGCAA CGGTCCAGCG ACAAGAATTC GCCCGCCTCT ATGAAGGGCT CGGCGAGAAC GGGCAGTCGC TCATCACCAA CTCAGGCGGC AAGGCGATTC GGCGTGTCCC CGCCTTCGAC CTGACATTTT CCGCGCCGCG CTCGGTGTCG CTGGCGTGGG CATTCGCGGA TGAGGATCTG CGGCGCAACC TCGAAGCTGC CCAGGAGCGC GCCGTCCGTG CCACCCTTGC CACGATCGAG CAGGAAGCCA TATACGCGCG CCGCGGCAAA GATGGCGCAT ACGTCGAAAA GGTCGCGCTG ACGGCCGCGT TGTTCCAGCA CGGCGAAAGC CGACCGGCGG AGCATGCCGA TGGTCGCCTC TTCGGTGATC CGAACCTTCA CACCCATGCC GTCGTCCTGA ACATGGCGAC ACGCGCCGAC GGCACGGTGG GTGCACTGCA TTCCACCGTC TTGCGCGACT GGAAGATGGC GGCCGGCGCT GTCTATCATG CCGCCCTCGC AAACGAGATG ACCGATCTCG GCTTCGGCAT CGATCGTGTC GGGCGGAACG GCACGTTCGA GCTGGCCGGC ATCGGCGACC AAGCCATCAC CTATTTTTCT GCGCGGCGGC AGGAAATCGA AAAGGAGCTG GCGGAGGCGG GCACGACCAG CGGTTCATCG GCTGCGCTGG CCTCCGCTGT CGCCAAATCA ACGCGCCACG CGAAAGAGCT GGACGCTGAT CGCGAGACCG TCTGGCGTGA GGCGGCGCAA TCGGCCGGTC TTGACGGTGA TATCCGCGCG GCGCTCCAGC AGCGATCTGC CCGGGAGTTT GTCGTCGGGG ATGCCGGGCG CATCTTCGCC GAGCGGGTGG CGACATTGCC GGCAGAATTG ACGCAGCATG AAAGCGTCGT CGACCGCCGC GAATTGGTTC GCTCCGTTCA CGCGGCAAGT GTCGGGCTCG GCCTGCCACT GTCGCGGGTT GACGGGGAGG TCGATCAGCT TGTCACCTCC GGGACATTCG TCGAAATCGG CCGCGATGCT ATCGGTCAGG TGCGCTATTC GACGCCGGAG ATGATCGCGA TCGAGCGTGA TCTGGTTGCG ACCGCCTCAA GACTGGCTGA CCGGCGCGGG GTCGGGATCG ATCCTGCCGA CATCAAGGCG CGAAGCGCTG CGCAAGGGTT GAGCGCCGAA CAGACCTTCG CCGCTGAAGC CGCAACCGGC CCAAACGCCA TCGTCGTCAT CGAAGGCGCG CCCGGCTCAG GCAAGACCAC GACGCTCGCG CCGATCGTCG GGGCCTATCA AGCGGCGGGG CATCGCGTCA TCGGCACGGC CACCGCCTGG CGTGTCGCCC GCGCCATTCA GCAGGACCTG AACATCGAAG CGCGGGCCAC CGCGTCCTGG GTCGAACGCC TCAAGAAGGG CGAGCGCTTC CTTGACGACA AGTCGGTTCT CATCGTGGAT GAAGCCGGCC TTCTGTCCTC GCGGGAGATG CATGCGCTGC TGTCGGAGGT CGAACGCGCG CAAGCCAAGG CGATCCTCGT CGGCGATCGC CGGCAATTGC AGGCGATCGG CGCGGGCCCG GGCCTCGATC TCGTCGTTCG CAGTGTCGAG GCCACGCGCG TTGACACCAT TGTCCGCCAG CGTGACGCCT GGGCGCGGCA GGCCGTGACG GATTTTGGCA CGGGTCGGGC CAATGAGGCG CTTGACGCAT TCCAGGCGCA CGGCTGCTTC GAAGAAGCTC CCACCTACCG GGCTACGCTG CAGCGGATCG TCGAACTCCG GAACCATGCA AGAGCCGAGC ATCCCGACAG CTTCACCCTC CTGATCGCCC GGACCAACAA GCAGGTCGCG GATATCTCGC GGGCGGTTCG CGCTGAACTC AAACGTGAGG GCGTCATTCA CAGCGCGGAA GCCAGCGTCG AGGCGGTCAC GCCATCGGGT CAGACAACCC GCATCGAAAT CGCGGCCGGC GACCAAATCC GCTTCCAGCT CCGCAACGAT CAGCTTGGTG TCGTCAACGG CACGGTTGCG ACCGTGACCG CCGTCCATCC CGATCCGTCG AAAGAACCGA GTACGCCCGG CAACATCCGC ATTGAGGCGG TCATCGACAG GCGCCGCATC AGCTTTGTTC CCGCCGACAT CGCCGACGAG CGCGGGCGAG CCAGGCTCGG CTGGGCCTAC GCAAGCACCG TGCACGGCGC GCAGGGCATG ACCGTCGATC GGGCGGTCGT CCTGCTCGAT CCCCGGTTCG ATCGCCATGC CGCCTATGTA GCCGCAAGCC GCGCCCGCGA CGAAACCCGG CTCGTCGTCG ATCGCTCCCA GATAGAGGCG CTTCTTTCTT CCCGTCTGCC GCTGGATCGC ACACAGCAGG CCGAACCCGC ATCCGCGGAA GACCGGCGCG CGCAGCTCGC CGGGCGATTG TCCAGCGGAC ACACCAAGAC GTCGACGATC GCCGTGATCG AACAGGCCGC TCTCCCGGTG AAACATGCCG ACCGACTTCA CAGCCGGCCA TCGGCAGATC GGGCGATGCA GCCGCCCACA AAGCCACCTG CCGCGCAGGA GGCCGCCCGC GCCGCTCCGC GATCCAGCGC GCGCACACCT GACCGCGGGT TGGAATATGG CCGTTGA
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Protein sequence | MASILETASV VATWNVAASS AYYVRGAEYY LGSREPEGVW YAPRGDLGRR DAATVQRQEF ARLYEGLGEN GQSLITNSGG KAIRRVPAFD LTFSAPRSVS LAWAFADEDL RRNLEAAQER AVRATLATIE QEAIYARRGK DGAYVEKVAL TAALFQHGES RPAEHADGRL FGDPNLHTHA VVLNMATRAD GTVGALHSTV LRDWKMAAGA VYHAALANEM TDLGFGIDRV GRNGTFELAG IGDQAITYFS ARRQEIEKEL AEAGTTSGSS AALASAVAKS TRHAKELDAD RETVWREAAQ SAGLDGDIRA ALQQRSAREF VVGDAGRIFA ERVATLPAEL TQHESVVDRR ELVRSVHAAS VGLGLPLSRV DGEVDQLVTS GTFVEIGRDA IGQVRYSTPE MIAIERDLVA TASRLADRRG VGIDPADIKA RSAAQGLSAE QTFAAEAATG PNAIVVIEGA PGSGKTTTLA PIVGAYQAAG HRVIGTATAW RVARAIQQDL NIEARATASW VERLKKGERF LDDKSVLIVD EAGLLSSREM HALLSEVERA QAKAILVGDR RQLQAIGAGP GLDLVVRSVE ATRVDTIVRQ RDAWARQAVT DFGTGRANEA LDAFQAHGCF EEAPTYRATL QRIVELRNHA RAEHPDSFTL LIARTNKQVA DISRAVRAEL KREGVIHSAE ASVEAVTPSG QTTRIEIAAG DQIRFQLRND QLGVVNGTVA TVTAVHPDPS KEPSTPGNIR IEAVIDRRRI SFVPADIADE RGRARLGWAY ASTVHGAQGM TVDRAVVLLD PRFDRHAAYV AASRARDETR LVVDRSQIEA LLSSRLPLDR TQQAEPASAE DRRAQLAGRL SSGHTKTSTI AVIEQAALPV KHADRLHSRP SADRAMQPPT KPPAAQEAAR AAPRSSARTP DRGLEYGR
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