| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7244 |
|---|
| Symbol | |
|---|
| ID | 5155912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 7611827 |
|---|
| End bp | 7612534 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640561916 |
|---|
| Product | putative flagellar basal-body rod modification protein FlgD |
|---|
| Protein accession | YP_001243027 |
|---|
| Protein GI | 148258442 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1843] Flagellar hook capping protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATTG AATCGACCTC ATCACCTCAG AAGGCAGTCG CCACAGGGTC AAAGACCGGC
ACAGAGGAGC CGGTCAAGCC GTCGGCCAGC GCACGGACGG GAATCGCAGA CAATTTTCAG
TCATTCCTGA CGCTGCTCAC AACGCAGCTC AATCACCAGA ACCCTCTCGA TCCGCTCAAC
GTCAATCAGT TCACCCAACA GCTCGTCCAG TTCGCGCAGG TCGAGCAGCA GCTCAAGGGC
AACACGCTTC TCGAACGGCT CGTCGAGGCT CAAAAATCGA CGCAATCGAC ACAGGCGTTG
ATGCTCGTCG GCAGGACGGC AGTGGTCGAT GGCAGCGAGG CCAGCCTCGC GAAGGGCGGC
TCCGCCGTGT GGAACCTGAG ATCCCCCAAG AGTGCCACGG CCACGGTTTC GGTGAGGAAC
GTGACCGGTC AGTTGGTCTA TTCCGCGACC CGTGCATTGA ACTCCGGCGA TACAAGCTTT
GCTTGGGACG GTCAGGCGAG CAATGGTGCG ATGTGCCCTC CCGGCCAGTA CAAATTGGTC
GTCGATGCGA AGGATATCGG CGGAAAGCCC ATCGCCGTGG CGGCAGAGGC GCAGGGCGTC
GTTGAATCTG TCGACCTCAC CAAGAGTCCA ATCATGCTGT CGATCGGCGG TCGGAACTAT
CCGCTCGACA GTGTCAGGCG GGTGATCCAC GCGAGCGCAC GGGTCTAG
|
|---|
| Protein sequence | MGIESTSSPQ KAVATGSKTG TEEPVKPSAS ARTGIADNFQ SFLTLLTTQL NHQNPLDPLN
VNQFTQQLVQ FAQVEQQLKG NTLLERLVEA QKSTQSTQAL MLVGRTAVVD GSEASLAKGG
SAVWNLRSPK SATATVSVRN VTGQLVYSAT RALNSGDTSF AWDGQASNGA MCPPGQYKLV
VDAKDIGGKP IAVAAEAQGV VESVDLTKSP IMLSIGGRNY PLDSVRRVIH ASARV
|
|---|
| |