| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7239 |
|---|
| Symbol | |
|---|
| ID | 5150419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 7603049 |
|---|
| End bp | 7603888 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640561911 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001243022 |
|---|
| Protein GI | 148258437 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTTCT TCGACCATAG AGCCTGCGCG CATCGGGCGG AGCGCACACA GTCGCAGATC
GTAACGCAGG GTGTCGACCA CATCTTCATT GCGTTACAGA CAGCCGGTGC CACCCGGATG
GCGCATGTCG ACGGCGAGCT TGTTGCGACG CCCGGCGATT TTGTTGTTCT CGACCTTGCG
CGCAGCTTTC GTCTCGCCAC GGAAGGCATG TCTGCTATCC AGATCTGCAT TCCCAGGCGC
CATATCGCGC AATATGCCGG CCGTCCAAAT GCGCCGGCTG CAAGGGTTCT GCCGTCACGC
GGCAATCCGC TGCTGAAGCT GCTGGCCGAT CATTTGTTGA ATATGCGGGC ATGCCTGACG
CGCGCCGACG CCGAGCAGAG AAATCATCTG ACCTCAGCGG CGCTTGCGAT CTGCAACGCG
GTCCTGACTG CGGACGATGA AGATCGCGGC GACGATCTTG CGCCGGCTGA GATCCAGCTT
CGTCAATTCG TCGCGCAGAA CCTTCATCGG CCCGATCTTG GCGTGGAACT GCTCTGTGCG
ACGTTTGGTC TCTCTCGGAC CCCGTTGTAC AAGCTGTTTG AGGCCGATGG TGGCGTCGCG
AATTATATCC GAGATCGGCG CATGGCCCAT GCTATGCGGA TCTTGGCCTG CGCCGATGGT
GGAGCCGCAC AGCGCGTCTC GACGGTTGCT TACGCCTGCG GCTATCAATC CGAGAAGATC
TTCAGCCGTG CCTTTCGTCG CCGGTACGGC ATCAATCCCA GCCAGGTGAA GCGGGCATTT
CCGCAGGTCT CCATCCGGCC CAAGGGCGCG CTTCTGGCCT CGTGGCTTCA GAACCTGTGA
|
|---|
| Protein sequence | MLFFDHRACA HRAERTQSQI VTQGVDHIFI ALQTAGATRM AHVDGELVAT PGDFVVLDLA
RSFRLATEGM SAIQICIPRR HIAQYAGRPN APAARVLPSR GNPLLKLLAD HLLNMRACLT
RADAEQRNHL TSAALAICNA VLTADDEDRG DDLAPAEIQL RQFVAQNLHR PDLGVELLCA
TFGLSRTPLY KLFEADGGVA NYIRDRRMAH AMRILACADG GAAQRVSTVA YACGYQSEKI
FSRAFRRRYG INPSQVKRAF PQVSIRPKGA LLASWLQNL
|
|---|
| |