| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7230 |
|---|
| Symbol | |
|---|
| ID | 5150869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 7592159 |
|---|
| End bp | 7593910 |
|---|
| Gene Length | 1752 bp |
|---|
| Protein Length | 583 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640561903 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001243014 |
|---|
| Protein GI | 148258429 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACC GGACACCGGG GGTCGCCGCA CCCCCATCGG CTCCGGCTCG GTCGGGATCA
ACGCTGGACT GCCGACGGAG CGAAGCAGCC CCGCTTCCGC TCTGCTCCTG CCAACATCTG
CTCCAGGGAC TGTATCGCAC ATACGATCAC TGGCTTTCGG CGGCCGCCGA ACAGTCGGAT
CGGAGTCCGG CGGCTTGGCG TCGTCCCTTC CTGCGGTGGC TGGACGCCGT CGAGGGGGGC
TGGGGCGTGC CGCTGCTGCT GGCCTGTTTC GCGCTGGTCT GGACGGCATA TCTCACCGTC
GCCTATTCCG GCGCCGGACT GCATCCGGAC ACCCTCGAGA CCTGGAGCTT TGGAAGGCAT
TTCGCCTGGG GCTACTTCAA GCATCCGCCG CTGATGGGAT GGGTGGCTGG CGCCTGGAGC
CGCCTGTTTC CGCCGACCGA CTGGTCGTTT CACCTGATGG CGATGACCAA TGCTGCGCTC
GCGCTGTGGT TCGTCGACCA GATTTCGCGG CGTTTCGTGA CCGGAGACAA GCGCGTGATC
GTGCTGCTTC TCCTGATGCT CACGCCGGTG TACCAGTTTC ACGCGCAGCG GTTCAATGCG
AACTCCGTGC AACTGGCGAC TTGGCCACTC GCAACCTATT GCTTTCTGCG CGCGTTTGAA
TCGCGGACGT TTCTCTGGGC CGCCATGGCG GGATTGACCG CCGCGGTCGC AATGCTCGGC
AAATACTACT CGATCTTCCT GATCGCGAGT TTCGGACTGG CGGCAATGCT ACATCCGCTC
CGCCGGGCCT ACTTCACGTC GTTCTCGCCC TGGATCTCCG CCATGGTCGG ACTGGCCGCG
CTATGGCCGC ATCTGGATTG GCTCATTGCG AGCGACGCGG CTCCGATTCA TCACGCACTG
ACGCATGCCA ATTCCGACAT GCTGAGATCG CTCCACGATT CATTCTCATT CGTGATGGGA
CTTGCTGCCG CCCTGGCTCT ATCCGCCTTG ACCTGGGTCG TGGCGGCCGG CCGCAGGATC
GCGCGATTCC CGAGGGACTT CGTAGCGCTT GATGACGGCC TGCGCCTGCT GTTTTACGTT
GCTATTGGAA CCATCTGCCT TCCGGTCGCC AACGCCCTGA TCATGGGCAC TGATTTGCCA
TCGCTCTGGG CGGTTCAGGG GCTTTTCTTG TTTGTCGTGC TGGTGGTGTG CGGCGCAAGT
TATGGGATCG AGCGGTTCTA CACTGTCAAT ATGACTGTCC TGGCTGCCGC AATCGCCGTC
GTCGCCGTCA CCATCGCTGC GCCGCTCCAT GCCCTCTACC GCAATTCGTT CGGCTATGAA
GAGGGCCGCG GTTTCTATCG CGCGGTCGCG TTCGAAACCA CCCGACAATG GCGCGAACTG
GTCGGGATTC CGCTCAAATC TGTCGTCGGC GACGAGAGTC TCGGATTTGC AGTCGCATTT
TACAGTCCCG ATCATCCGTT TTACGGATTG TCTCCGTCAC TCGCCCAGGC TGCCGCGGAC
GGGCCTACCG GTGCGACTCA GGATCAAGGC TGGGCCTCCG TCTGCTTTCT TGATCAAGTC
GATTGTATTG AGGCCGCAAC ATCGCTGGCC GTTGCGGCAG GGAATTATGT GAGGCGCGAG
TTCACAATGC AGTCGCAACT GTTTGGCTTG GCCGGGCTGT CGCGAGCAGC CGTCGCGTTT
TTCGTGCTGC CGAAGGTCGA CGGCCTGCGG TCGTCACACC CGCATGATTC AGCCCGGCCG
GGCAGCAAAT AA
|
|---|
| Protein sequence | MIDRTPGVAA PPSAPARSGS TLDCRRSEAA PLPLCSCQHL LQGLYRTYDH WLSAAAEQSD
RSPAAWRRPF LRWLDAVEGG WGVPLLLACF ALVWTAYLTV AYSGAGLHPD TLETWSFGRH
FAWGYFKHPP LMGWVAGAWS RLFPPTDWSF HLMAMTNAAL ALWFVDQISR RFVTGDKRVI
VLLLLMLTPV YQFHAQRFNA NSVQLATWPL ATYCFLRAFE SRTFLWAAMA GLTAAVAMLG
KYYSIFLIAS FGLAAMLHPL RRAYFTSFSP WISAMVGLAA LWPHLDWLIA SDAAPIHHAL
THANSDMLRS LHDSFSFVMG LAAALALSAL TWVVAAGRRI ARFPRDFVAL DDGLRLLFYV
AIGTICLPVA NALIMGTDLP SLWAVQGLFL FVVLVVCGAS YGIERFYTVN MTVLAAAIAV
VAVTIAAPLH ALYRNSFGYE EGRGFYRAVA FETTRQWREL VGIPLKSVVG DESLGFAVAF
YSPDHPFYGL SPSLAQAAAD GPTGATQDQG WASVCFLDQV DCIEAATSLA VAAGNYVRRE
FTMQSQLFGL AGLSRAAVAF FVLPKVDGLR SSHPHDSARP GSK
|
|---|
| |