| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7088 |
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| Symbol | |
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| ID | 5149764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7434282 |
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| End bp | 7435088 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640561766 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_001242877 |
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| Protein GI | 148258292 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.847734 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCCG TCCCCACCGG AGCGACCCGG CTCCACATCA TCATCGGTGA TCCGATCGCG
CAGGTGCGCG CGCCGGCCGG CGTCAGCCGG GCCTTTGCGG AGCGTGGCAG CGATGCGATC
CTCGTCCCAG TCCAGGTCGC ACCAGTTGAT CTCGCCGGCT TCCTCGCGAC GGCGACGCGC
GTGAAGAATC TCGATGGCAT CGTCGCGACC ATCCCGCACA AATTCGCCTG CTACCGCGCC
TGCGCCACCG CCACCGAGCG TGCGCATTTC ATCGGCGCGG TCAACCTGAT GCGGCGCAGC
CCCAATGGCG GCTGGCATGG CGACATGGTC GATGGCCTGG GCTTCGTCGG TGCTGCGCGG
GCCAAGGGCT TTGATCCGAA CGGCACCCGC GCGCTGCAGA TCGGCGCCGG CGGCGCCGGA
TCGGCGATTG CGCTGGCGCT GATCGATGCG GGCGTGCGTG AGCTCGCGAT TCACGACAGC
GACGCCGGGC GGCGTGATGC GCTGATCGCG CGCCTCAATG AGCGGGGTAG GGGCCGGGCG
CTGATCGGCG CCATGGATGC AACCGGATTC GACTTGGTGG CGAACGCGAC GCCGGCCGGC
ATGCAGCCGG GCGATCCCCT GCCGGTCGAC ATGGCGACGG TGAGCCCGTC AGCCTATTGC
GGCTGCGTGA TCACGCGTCC CGAGGTCTCG CCGTTCATCG CCGCCGCGCG TGAGCGCGGC
TGCCTGACGG CGACTGGCAC CGACATGTAC CGGGCGCTGG AGCGCGTAAT GGTCGACTTC
CTGTTGTCGC GACAGCCGCC ATCCTGA
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| Protein sequence | MIPVPTGATR LHIIIGDPIA QVRAPAGVSR AFAERGSDAI LVPVQVAPVD LAGFLATATR
VKNLDGIVAT IPHKFACYRA CATATERAHF IGAVNLMRRS PNGGWHGDMV DGLGFVGAAR
AKGFDPNGTR ALQIGAGGAG SAIALALIDA GVRELAIHDS DAGRRDALIA RLNERGRGRA
LIGAMDATGF DLVANATPAG MQPGDPLPVD MATVSPSAYC GCVITRPEVS PFIAAARERG
CLTATGTDMY RALERVMVDF LLSRQPPS
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