| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7025 |
|---|
| Symbol | |
|---|
| ID | 5151201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 7357518 |
|---|
| End bp | 7357955 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640561704 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001242815 |
|---|
| Protein GI | 148258230 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.016448 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.785807 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTGT GGCCTGCCGC GGCGTCGGCC GATCCCGATC CGGCCATCGC CGTGAATGTC
GATCAGGCGA AACTGGTCAA GCTGCCCGAC AGGGTCGCCA CCCTGGTGGT CGGCAACCCC
ATGATCGCGG ATGTCACTCT GCAGAGCGGC GGCATCATCG TCGTCACGGG CAAGAGCTAC
GGGGCGACGA ACTTCATTGC GATGGACCGC GGCGGCCAGG TGCTGGTCGA TCGCCAGATC
CAGGTGGCTG GTCCGACCGA CAGGCTGGTG ACGGTGTATC GCGGCGTCGA TCGTGAGACG
TATAGCTGTA TGCCTGTGTG CCAGCGTCGG GTGACGCTGG GAGACGGTGA CAATTACTTC
AAGTCGGTGC TCGAGCAGGC CGGAACGATG TCCAGCACGG CGAGCGGCAG CGCCGCATCC
GGCCCCAAGG CCAATTGA
|
|---|
| Protein sequence | MLLWPAAASA DPDPAIAVNV DQAKLVKLPD RVATLVVGNP MIADVTLQSG GIIVVTGKSY
GATNFIAMDR GGQVLVDRQI QVAGPTDRLV TVYRGVDRET YSCMPVCQRR VTLGDGDNYF
KSVLEQAGTM SSTASGSAAS GPKAN
|
|---|
| |