Gene BBta_6971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6971 
Symbol 
ID5149787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7307942 
End bp7308733 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content65% 
IMG OID640561653 
ProductD-beta-hydroxybutyrate dehydrogenase 
Protein accessionYP_001242764 
Protein GI148258179 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA ATTTGAAGGG CAAGACCGCT GTGGTGACCG GCTCGACCAG CGGCATCGGA 
CTCGCCATTG CGCGCGGCTT TGCCAGCGCC GGGGCGAACA TCGTGCTCAA CGGCTTTGGC
GCTGCCGCCG ACATCGAGAA GGAGCGCGCC GCCATCGAGA GCGAGTTCAA GGTCAAGGCC
GTGCATTCGC CGGCCGACAT GAGCAAGCCG GCCGAGATCG CCGGCATGAT CGCGCTCGGC
GAGAGCACGT TCGGTGCGGT CGACATCCTC GTCAACAATG CCGGCATCCA GTTCGTCTCG
CCGGTCGAGG ACTTCCCGCC GGAGAAGTGG GAGCAGATCA TCGCGATCAA TCTCTCCTCG
GCGTTCTACG GCATCCACGC CGCCGTGCCC GGCATGAAGA AGCGCGGCTG GGGCCGCATC
ATCAACACGG CGTCCGCGCA CTCGCTGGTC GCCTCGCCGT TCAAGTCGGC CTATGTCTCG
GCCAAGCACG GCATCGCCGG TCTGACCAAG ACCGTGGCGC TGGAGCTCGC GACCTTCAAG
ATTACCTGCA ATTGCATCTC GCCGGGCTAT GTCTGGACGC CGCTGGTCGA GAAGCAGATC
CCCGACACCA TGAAGGCGCG CAATCTCACC AAGGAGCAGG TCATCAACGA CGTGCTGCTG
GCGGCGCAGC CGACCAAGGA GTTCGTGACG GTCGATCAGG TCGCAGCGCT GGCGCTGTTC
CTGTGCAGCG ACGAGGCGTC GCAGATCACC GGCGCCAACC TCTCGATCGA CGGCGGCTGG
ACCGCCGCGT AA
 
Protein sequence
MTTNLKGKTA VVTGSTSGIG LAIARGFASA GANIVLNGFG AAADIEKERA AIESEFKVKA 
VHSPADMSKP AEIAGMIALG ESTFGAVDIL VNNAGIQFVS PVEDFPPEKW EQIIAINLSS
AFYGIHAAVP GMKKRGWGRI INTASAHSLV ASPFKSAYVS AKHGIAGLTK TVALELATFK
ITCNCISPGY VWTPLVEKQI PDTMKARNLT KEQVINDVLL AAQPTKEFVT VDQVAALALF
LCSDEASQIT GANLSIDGGW TAA