Gene BBta_6961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6961 
Symbol 
ID5149802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7298194 
End bp7299996 
Gene Length1803 bp 
Protein Length600 aa 
Translation table11 
GC content70% 
IMG OID640561643 
Producthypothetical protein 
Protein accessionYP_001242754 
Protein GI148258169 
COG category[S] Function unknown 
COG ID[COG2845] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAGC TGAAGTCCCT CCTCAAGCTA TTGAACGAAC CCGGGCCGAT GGTGGTGCTC 
GCGGTCGTCA TCGCCATGCT TTTCGGGATT GCCGGGCCCG CCTCGGCCCA GTTCTTCAAT
TTCAACCCGT TCGCCTCGCC GCGTCCCGCC CCGCGCGGCG GCGGAGGGGG CGGTGGGGGC
TGGTTCGGCG GCGACTTCTT CGCCCCGTTC CAGCCGCAGC AGCCCAAGCG CGTGCCCCAG
GATTATTCCA AGGCGCCGCC GCAGGAGAAG CGCGACGGCA CGCCGGAGCG CTATGTGCTG
GTGCTCGGCG ACGGCATGGC CGACTGGCTC GCCTACGGCC TTGAAGACGC CTATTCCGAG
CAGCCTGACA TGGGCGTCAC CCGCAAGATC AAGACCAATT CGGGTCTCAT CAAGTACCAG
CCCAAGGGCG AGCCGTCCGA CTGGGCCGCC GCCGCCAAGG GCATCCTGGC CACCGAGCGT
GCCGACGCGA TCGTGATCAT GCTCGGCCTC AACGACCGTC TCCCGCTGCG CGAGCCGGCC
GTGGACAAGA CCAAGGACGA CAAGGCCAAG AAGGACGCCA AGACCAAGCC AGGCGAGACC
AAGCCGGGCG ACGCCAAGCC TGGCGATACC AAGGCTGGCG AGGCCAAACC GGGGGACGCC
AAGACAGCCG ACGGCAAGGC GGCCGACCCC AAAGCGGCCG AGGCCAAGCC GGATGGCAAA
CCCGACACCA AGGCCGACGC GGCCGCCAAG CCCGCCGACA GCGATTTGCC GCAGGACGAG
GTCGACAACG ACACGCCCGC GACCGCGGCA CCGGAAAAGA CCGCGCGATC GCCCAACGGC
ATCTACGACT TCCGCGACGA GCGCTGGATC GAGCTCTATT CGAAAAAGAT CGAGGAGATG
ATCGCGGTCG CCAAGAGCAA GGGCGTTCCC GTGCTCTGGG TCGGCCTGCC CGCGGTCCGC
GGCCCGAAGG GCACCGCGGA CACGCTGTTC CTGGATTCGC TGTATCGCGA TGTCGCCGGC
AAGGCCGGCA TCACCTATGT CGACGTCTGG GACGGTTTCG TCGACGAAGC CGGGCGCTTC
CTGCAGAAGG GCCCGGACTT CGAAGGCCAG ATCCGCCAGC TGCGGTCCTA TGACGGCGTC
TATTTCACCA AGGCCGGCGC GCGAAAGCTC GCCCACTACG CCGAGCGCGA GATCAATCGC
CTGCTCGCCG CCCGCTCGTC GCCGCTGGAA CTGCCGACCG AGCCGGCGAC GCCAGACGCC
AATGCCGTCC CGGGTCAGCC CGCGCCGCGA CCGATGGCCG GGCCGATTCT GCCGCTCGTC
GCGTCATCGG TCGGCACCGA TCAGCTGCTC GGCGGCCCTG GCTCGCGGCC CGCGGCCGTC
GATCCGTTGG CGGCAAGAAC GCTGGTCAAG GGCGAGGCCC TGAGCCCGCC GGCGGGGCGC
GCCGACGATT ACGTCTGGCC ACGCCGCGAG ATCGGCCGTG AGCAGGCCAA GGAGCCGCCG
AAAGAGCAGT CGAAACCGGA TACGCCCATG GCCACGACGA CCCCGGGCAC GGCGCCTGGC
GAGCCCGCCG CCGGTGCGCC GGCGGCCTCG CAGCGGCCGA GACGGCTGAC CACGCCCGGC
GCGACGTCGC CCGCCCAGGC ACCGCAACAG CCGAGCCAAG CGCCGCGCGA CTTCTTCGGC
TTCGGAACGC CGCAGCAGGC GCAGCCGCCG AGGCCGCCGG CGGCGCGTAA TCCCAACGCC
CCGCCACGGC CACCGGCGCC GGTCGGCCGC GCCGCAGCGG TGCTCGATTC GCCCTGGCGC
TGA
 
Protein sequence
MSKLKSLLKL LNEPGPMVVL AVVIAMLFGI AGPASAQFFN FNPFASPRPA PRGGGGGGGG 
WFGGDFFAPF QPQQPKRVPQ DYSKAPPQEK RDGTPERYVL VLGDGMADWL AYGLEDAYSE
QPDMGVTRKI KTNSGLIKYQ PKGEPSDWAA AAKGILATER ADAIVIMLGL NDRLPLREPA
VDKTKDDKAK KDAKTKPGET KPGDAKPGDT KAGEAKPGDA KTADGKAADP KAAEAKPDGK
PDTKADAAAK PADSDLPQDE VDNDTPATAA PEKTARSPNG IYDFRDERWI ELYSKKIEEM
IAVAKSKGVP VLWVGLPAVR GPKGTADTLF LDSLYRDVAG KAGITYVDVW DGFVDEAGRF
LQKGPDFEGQ IRQLRSYDGV YFTKAGARKL AHYAEREINR LLAARSSPLE LPTEPATPDA
NAVPGQPAPR PMAGPILPLV ASSVGTDQLL GGPGSRPAAV DPLAARTLVK GEALSPPAGR
ADDYVWPRRE IGREQAKEPP KEQSKPDTPM ATTTPGTAPG EPAAGAPAAS QRPRRLTTPG
ATSPAQAPQQ PSQAPRDFFG FGTPQQAQPP RPPAARNPNA PPRPPAPVGR AAAVLDSPWR