Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6961 |
Symbol | |
ID | 5149802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 7298194 |
End bp | 7299996 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640561643 |
Product | hypothetical protein |
Protein accession | YP_001242754 |
Protein GI | 148258169 |
COG category | [S] Function unknown |
COG ID | [COG2845] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAGC TGAAGTCCCT CCTCAAGCTA TTGAACGAAC CCGGGCCGAT GGTGGTGCTC GCGGTCGTCA TCGCCATGCT TTTCGGGATT GCCGGGCCCG CCTCGGCCCA GTTCTTCAAT TTCAACCCGT TCGCCTCGCC GCGTCCCGCC CCGCGCGGCG GCGGAGGGGG CGGTGGGGGC TGGTTCGGCG GCGACTTCTT CGCCCCGTTC CAGCCGCAGC AGCCCAAGCG CGTGCCCCAG GATTATTCCA AGGCGCCGCC GCAGGAGAAG CGCGACGGCA CGCCGGAGCG CTATGTGCTG GTGCTCGGCG ACGGCATGGC CGACTGGCTC GCCTACGGCC TTGAAGACGC CTATTCCGAG CAGCCTGACA TGGGCGTCAC CCGCAAGATC AAGACCAATT CGGGTCTCAT CAAGTACCAG CCCAAGGGCG AGCCGTCCGA CTGGGCCGCC GCCGCCAAGG GCATCCTGGC CACCGAGCGT GCCGACGCGA TCGTGATCAT GCTCGGCCTC AACGACCGTC TCCCGCTGCG CGAGCCGGCC GTGGACAAGA CCAAGGACGA CAAGGCCAAG AAGGACGCCA AGACCAAGCC AGGCGAGACC AAGCCGGGCG ACGCCAAGCC TGGCGATACC AAGGCTGGCG AGGCCAAACC GGGGGACGCC AAGACAGCCG ACGGCAAGGC GGCCGACCCC AAAGCGGCCG AGGCCAAGCC GGATGGCAAA CCCGACACCA AGGCCGACGC GGCCGCCAAG CCCGCCGACA GCGATTTGCC GCAGGACGAG GTCGACAACG ACACGCCCGC GACCGCGGCA CCGGAAAAGA CCGCGCGATC GCCCAACGGC ATCTACGACT TCCGCGACGA GCGCTGGATC GAGCTCTATT CGAAAAAGAT CGAGGAGATG ATCGCGGTCG CCAAGAGCAA GGGCGTTCCC GTGCTCTGGG TCGGCCTGCC CGCGGTCCGC GGCCCGAAGG GCACCGCGGA CACGCTGTTC CTGGATTCGC TGTATCGCGA TGTCGCCGGC AAGGCCGGCA TCACCTATGT CGACGTCTGG GACGGTTTCG TCGACGAAGC CGGGCGCTTC CTGCAGAAGG GCCCGGACTT CGAAGGCCAG ATCCGCCAGC TGCGGTCCTA TGACGGCGTC TATTTCACCA AGGCCGGCGC GCGAAAGCTC GCCCACTACG CCGAGCGCGA GATCAATCGC CTGCTCGCCG CCCGCTCGTC GCCGCTGGAA CTGCCGACCG AGCCGGCGAC GCCAGACGCC AATGCCGTCC CGGGTCAGCC CGCGCCGCGA CCGATGGCCG GGCCGATTCT GCCGCTCGTC GCGTCATCGG TCGGCACCGA TCAGCTGCTC GGCGGCCCTG GCTCGCGGCC CGCGGCCGTC GATCCGTTGG CGGCAAGAAC GCTGGTCAAG GGCGAGGCCC TGAGCCCGCC GGCGGGGCGC GCCGACGATT ACGTCTGGCC ACGCCGCGAG ATCGGCCGTG AGCAGGCCAA GGAGCCGCCG AAAGAGCAGT CGAAACCGGA TACGCCCATG GCCACGACGA CCCCGGGCAC GGCGCCTGGC GAGCCCGCCG CCGGTGCGCC GGCGGCCTCG CAGCGGCCGA GACGGCTGAC CACGCCCGGC GCGACGTCGC CCGCCCAGGC ACCGCAACAG CCGAGCCAAG CGCCGCGCGA CTTCTTCGGC TTCGGAACGC CGCAGCAGGC GCAGCCGCCG AGGCCGCCGG CGGCGCGTAA TCCCAACGCC CCGCCACGGC CACCGGCGCC GGTCGGCCGC GCCGCAGCGG TGCTCGATTC GCCCTGGCGC TGA
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Protein sequence | MSKLKSLLKL LNEPGPMVVL AVVIAMLFGI AGPASAQFFN FNPFASPRPA PRGGGGGGGG WFGGDFFAPF QPQQPKRVPQ DYSKAPPQEK RDGTPERYVL VLGDGMADWL AYGLEDAYSE QPDMGVTRKI KTNSGLIKYQ PKGEPSDWAA AAKGILATER ADAIVIMLGL NDRLPLREPA VDKTKDDKAK KDAKTKPGET KPGDAKPGDT KAGEAKPGDA KTADGKAADP KAAEAKPDGK PDTKADAAAK PADSDLPQDE VDNDTPATAA PEKTARSPNG IYDFRDERWI ELYSKKIEEM IAVAKSKGVP VLWVGLPAVR GPKGTADTLF LDSLYRDVAG KAGITYVDVW DGFVDEAGRF LQKGPDFEGQ IRQLRSYDGV YFTKAGARKL AHYAEREINR LLAARSSPLE LPTEPATPDA NAVPGQPAPR PMAGPILPLV ASSVGTDQLL GGPGSRPAAV DPLAARTLVK GEALSPPAGR ADDYVWPRRE IGREQAKEPP KEQSKPDTPM ATTTPGTAPG EPAAGAPAAS QRPRRLTTPG ATSPAQAPQQ PSQAPRDFFG FGTPQQAQPP RPPAARNPNA PPRPPAPVGR AAAVLDSPWR
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