Gene BBta_6923 details

Gene Information

• Locus tag: BBta_6923
• Symbol: cbbT
• ID: 5150547
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bradyrhizobium sp. BTAi1
• Kingdom: Bacteria
• Replicon accession: NC_009485
• Strand: +
• Start bp: 7250198
• End bp: 7252183
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640561605
• Product: transketolase
• Protein accession: YP_001242716
• Protein GI: 148258131
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 28
• Fosmid unclonability p-value: 0.412473
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACGCAGG TCGATCATTC CCGCATGGCC AACGCCATCC GCGCGCTCGC GATGGATGCC 
GTCGAGAAGG CGAAATCGGG CCATCCCGGC CTGCCGATGG GCGCCGCCGA TGTCGCCACC 
GTGCTGTTCA CCCGCGTGCT GAAATATGAT GCTGCAGCGC CCGCCTGGCC GGACCGCGAC 
CGCTTCGTGC TGTCGGCCGG CCACGGCTCG ATGCTGCTCT ACGCGCTGCT GTATCTCACC 
GGCAACGAGG AGATGACGCT CGACCAGATC AAGCGTTTCC GCCAGGTCGA TTCGCTCACC 
CCCGGCCATC CGGAAAACTT CCGCACCAAG GGCATCGAGA CCACCACCGG CCCGCTCGGC 
CAGGGCATCT CGACCGCCGT CGGCATGGCG CTGGCCGAGA AGATGCTGCA GGCTGAATAT 
GGCAAGAAGA TCGTCGACCA TCACACTTAC GTGCTGGCCT CCGACGGCGA CCTGATGGAG 
GGCATCTCCC AGGAAGCGAT CGCGATGGCC GGGCACTGGA AGCTCAACAA GCTGATCGTG 
CTGTGGGACG ACAACGGCAT CTCGATCGAC GGCCCGCTGT CGATCGCCGA CTCGGTCGAC 
CAGGTGAAGC GCTTCAAGTC GGCCGGCTGG GCCGCCGAGC TGATCGACGG CCATGATCCG 
GAGGCGATCG CCGCCGCGAT TGCCCGTGCG CAGAAATCCT CCAGGCCGTC GCTGATCGCC 
TGCAAGACCA CGATCGGCTA TGGCGCCCCG ACCAAGGCCG GCACCTCCAA GGTGCATGGC 
GAGGCGCTCG GGCCGGAGGA ATTGAAGGGC GCCAAGGAGA AGCTCGGCAT CTCCCTGGAA 
CCGTTCTCGG TGCCGGACGA CGTGCTGGCG GCCTGGCGCG AGGCCGGCCG CCGCGGCGCG 
CCTGCGCGCG CCGAATGGGA GACGCGGCTC GCCGAGATGG GCCCGCGCAA GCGCGCCGAG 
TTCGAGCGCC GGTTGCGCCA TGAGCGTCCC GCGGCGCTCG CAAAAGCGCT GAAGGACCAC 
AAGAAGGCGC TGCTGGAGAC CCCGCTCAAC ATCGCGACGC GCAAATCGTC GGAGGCCGCG 
ATCGAGGTGA TCGCCGCGGC GATGCCGTTC GAATTCGTCG CAGGCTCCGC CGACCTCACC 
GGCTCCAACA ACAACAAGGC GAAGTCGGCC ACCTCGTTCT CGGCCAAGAC GCCGAAGGGC 
CGCTTCATCC ATTACGGCAT CCGCGAGCAC GGCATGGCCG CGGCCATGAA CGGCATCTTT 
CTGCATGGCG GCTTCGCGCC GAACGGCGCC ACCTTCCTGG TGTTCTCCGA CTATGCCCGC 
GGCGCGATGC GGCTGTCGGC GCTGATGGGT GCCGGCGTCG TCTATGTCCT GACGCACGAC 
TCGATCGGCC TCGGCGAGGA CGGCCCGACG CATCAGCCGG TGGAGCATCT GGCGGCGTTG 
CGCGCGATCC CGAACATGCG CGTGTTCCGC CCGGCCGATG CGGTCGAGAC CGCCGAGTGC 
TGGGAGCTGG CGCTGAACCG CACCAACGGG CCAACCGTGC TGGCGTTGAC GCGGCAGAAC 
CTGCCGCAGC TGCGCACCTC GGCCCCGTCG GACAATCCGT GCAGCCATGG CGGCTATGAG 
CTGGTCGCAG CCCAAGGCGA GGCCAAGGTG TCGCTGTTCG CCACCGGCTC CGAGGTCGAG 
ATCGCGGTCG CCGCGCAGAA GCAGCTCGCC GAACGTGGCA TTCCAGCGCG CGTGGTCTCG 
GTGCCGTCGC TGGAGCTGCT GCTGGAGCAG CCGGAGGACG CGAAGGCCGC CATCATCGGC 
AAGGCACCGG TCAAGATCGC GATCGAGGCC GCGGTGCGCT GGGGCTGGGA CGCCGTGATC 
GGCTCGGACG GCATCTTCAT CGGCATGCAT TCGTTCGGCG AGAGCGGCCC CTACAAGGAG 
CTCTACAAGC ATTTCGGCAT CACCGCCGAG GCCGCCGTGG ACGCGGCCGT GAAGCGGCTG 
GGCTGA 

 

Protein sequence

MTQVDHSRMA NAIRALAMDA VEKAKSGHPG LPMGAADVAT VLFTRVLKYD AAAPAWPDRD 
RFVLSAGHGS MLLYALLYLT GNEEMTLDQI KRFRQVDSLT PGHPENFRTK GIETTTGPLG 
QGISTAVGMA LAEKMLQAEY GKKIVDHHTY VLASDGDLME GISQEAIAMA GHWKLNKLIV 
LWDDNGISID GPLSIADSVD QVKRFKSAGW AAELIDGHDP EAIAAAIARA QKSSRPSLIA 
CKTTIGYGAP TKAGTSKVHG EALGPEELKG AKEKLGISLE PFSVPDDVLA AWREAGRRGA 
PARAEWETRL AEMGPRKRAE FERRLRHERP AALAKALKDH KKALLETPLN IATRKSSEAA 
IEVIAAAMPF EFVAGSADLT GSNNNKAKSA TSFSAKTPKG RFIHYGIREH GMAAAMNGIF 
LHGGFAPNGA TFLVFSDYAR GAMRLSALMG AGVVYVLTHD SIGLGEDGPT HQPVEHLAAL 
RAIPNMRVFR PADAVETAEC WELALNRTNG PTVLALTRQN LPQLRTSAPS DNPCSHGGYE 
LVAAQGEAKV SLFATGSEVE IAVAAQKQLA ERGIPARVVS VPSLELLLEQ PEDAKAAIIG 
KAPVKIAIEA AVRWGWDAVI GSDGIFIGMH SFGESGPYKE LYKHFGITAE AAVDAAVKRL 
G