Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6886 |
Symbol | |
ID | 5151231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 7213884 |
End bp | 7214603 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640561568 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001242679 |
Protein GI | 148258094 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0975429 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0518769 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTGGC GCAAGGAAGA GCGCCGCGCC GAGCGCGGCT ATCATCACGG CAACCTCAAG GAGGCGCTGC TGCAGGCGGC GCTCGACCTG ATTGCGCAAA AGGGCGCCGC CGGCTTCACC TTCGCCGATG CCGCCCGCAT GGCCGGCGTC AGCCCGGCCG CGCCATACCG TCACTTCCGC GACCGTGACG AACTGCTGTC CAGCATCGCC CAGCGCGGCT TCGAGCAGTT CGAAGCCCAA CTCGCGGCGG CCTGGGACGA TGGTCGCCCG GATACGGTCA CCGCGTTCGA GCGGGTCGGC AAGGCCTATC TCGCCTTCGC CCGGACCGAG CCCGCATTCT ACTCGGCGAT GTTCGAATCC GGCGTGGCGG CGGACTCAAC GGCCGGGCTG CTGGCGGCCG GCGAGCGTGC ATTCGGCGTC ATTCGCGCTG CCGCCGAGCG GCTCGCGGCG CTGGCGCCGC CAAATGTGCC GCGGCCGCCG GCGCTGATGA TGGCGCTGCA CATCTGGTCG ATGTCGCATG GCGTCGCCTC GCTGTTTGCG CGCGGTGATG CGGCCCGGCG CAAGCTGCCG ATGTCGCCGG AAGAGCTGCT GGAGGCCGAG GTGCTGATCT ATCTGCGTGG GCTCGGCTTC ACCACCGACC GCCGGCCGGC CTCCGCAGCC GAGCCGCCGC CGCTGCCGGA CGACGACAAG CCGGCCGGGC CGTGGGGCCG GTCCAAATAA
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Protein sequence | MSWRKEERRA ERGYHHGNLK EALLQAALDL IAQKGAAGFT FADAARMAGV SPAAPYRHFR DRDELLSSIA QRGFEQFEAQ LAAAWDDGRP DTVTAFERVG KAYLAFARTE PAFYSAMFES GVAADSTAGL LAAGERAFGV IRAAAERLAA LAPPNVPRPP ALMMALHIWS MSHGVASLFA RGDAARRKLP MSPEELLEAE VLIYLRGLGF TTDRRPASAA EPPPLPDDDK PAGPWGRSK
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