| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6883 |
|---|
| Symbol | |
|---|
| ID | 5151228 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 7211585 |
|---|
| End bp | 7212064 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640561565 |
|---|
| Product | putative TolR protein |
|---|
| Protein accession | YP_001242676 |
|---|
| Protein GI | 148258091 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.604254 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0755944 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATGA GCATGGGAAG CGCGTCCGGC GGCGGTGGCC GTCGCGGACG GCGCAAGGCA
CCGGTGATGG CGGAGATCAA CGTCACGCCG ATGGTCGACG TCATGCTGGT GCTGCTGATC
ATCTTCATGG TCGCCGCGCC GCTGCTCACC GTGAATATCC AAGTTGACCT GCCGCAGGCG
CAAGGCGGCT CGGCTTCGAC CGCGGACGCC AAGCCGCCGC TCGAGGTGAC CGTCAAGAAG
ACCGGCGGCG GCTGCGCCTC CAAGGTCGAC GTCTATCTCG GCGAGACGCA GATCGGGATC
AACGAGCTCG GACCGAAGAT CAAGGCGATG AAGGAAGCCG GCGCTGGCGG CGGCGACAAT
GTCGTCAAGA TTCGCGGTGA TCGCGACGCC TGCTATTCCG ATATGATGAA GGTGCTGGGG
CTGGCGCGCG ACGCCGGCTA TCGGGCCAGC ATCGTCGTGC TGCCGGAACA GGGCTCATGA
|
|---|
| Protein sequence | MGMSMGSASG GGGRRGRRKA PVMAEINVTP MVDVMLVLLI IFMVAAPLLT VNIQVDLPQA
QGGSASTADA KPPLEVTVKK TGGGCASKVD VYLGETQIGI NELGPKIKAM KEAGAGGGDN
VVKIRGDRDA CYSDMMKVLG LARDAGYRAS IVVLPEQGS
|
|---|
| |