Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6778 |
Symbol | |
ID | 5152872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 7061962 |
End bp | 7062789 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640561461 |
Product | cysteine protease transglutaminase-like protein |
Protein accession | YP_001242574 |
Protein GI | 148257989 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.172204 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATGTTGA TCAAGGTCGG ATTCGAGATT GTCTATTCGG CCCCCGCGGC CACGCCGATG GTCATCATGC TGTCGATCCA CCCGTCGCGC TTTCCGGACA TTGTCGGCAC CGAGACCATC ACGACCGAGC CCAATGTGCC GATCAAGTTC TATAATGACA GCTTCGGCAA TCTGTGCGGG CGGCTGGTGG CGCCCGCCGG CGGCGTCACC TTCCACGGCA GTGCCATCGT CCGCGACAGC GGAAAGCCGG ATGCAACCGA TCCCGCCGCC CAGCAGCTGC CGATCGAGGA GCTGCCCGAC GAGTTGCTGC TCTATCTGAT GCCGAGCCGC TATTGCGAGA CCGACAAGCT CACCGACATC GCCTGGTCGC TGTTCGGCAG CGCGCCGGCC GGGTGGGCGC GCGTGCAGGC GATCTGCGAC TTCGTGCACC GTCACGTCAC GTTCGGCTAT GAGCACGCGC ATGCGATGAA ATCGGCGCAT GACGTCTATC AGCAGCGCGC CGGCGTGTGC CGCGATTTTG CGCATCTGGC GCTGACCTTC TGCCGCTGCA TGGGCATCCC GGCGCGCTAT TGCACCGGCT ATCTCGGCGA TATCGGCGTG CCGCCGGACC CCGCGCCGAT GGATTTCTCG GGCTGGTTCG AAGTCTATCT CTCCGGCCGC TGGTATACGT TCGACGCCCG CCACAACATC CCGCGGATCG GACGCATCCT GATGGCGACC GGACGCGACG CCGCCGACGT CGCGCTGTCG ACCTCGTTCG GGCGCATGAT CCTGACCAAA TTCCAGGTCG TCAGCGACGA GATCGTGGCG GCCCGCGGCG CGGCGTGA
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Protein sequence | MMLIKVGFEI VYSAPAATPM VIMLSIHPSR FPDIVGTETI TTEPNVPIKF YNDSFGNLCG RLVAPAGGVT FHGSAIVRDS GKPDATDPAA QQLPIEELPD ELLLYLMPSR YCETDKLTDI AWSLFGSAPA GWARVQAICD FVHRHVTFGY EHAHAMKSAH DVYQQRAGVC RDFAHLALTF CRCMGIPARY CTGYLGDIGV PPDPAPMDFS GWFEVYLSGR WYTFDARHNI PRIGRILMAT GRDAADVALS TSFGRMILTK FQVVSDEIVA ARGAA
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