| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6705 |
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| Symbol | |
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| ID | 5155052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6983706 |
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| End bp | 6985256 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640561393 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_001242507 |
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| Protein GI | 148257922 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0425945 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGACC TCATTGTCGT CGGCGGCGGC TCCGCGGGAG CGGCGGTCGC AGCGCGTCTG
TCCGAACAGC CGGAACGGCG CGTGCTGCTG CTGGAGGCCG GCGCCGACTG GCGCGCGGAC
GAGGTGCCAT GGGAGATCGC GACGCCCAAT CCGATCCCGA TCATCCATGA TCGGGCCTTC
CAGGAGAAGT GGCAGTGGCC GCAGCTGATG TCGCGCCGGG TGGCAGGCCA GGAGATGCGG
TTCTACTGGC GCGGCAAGGG GCTCGGCGGC AGCTCGATGA TGAACGGCCA GATCGCGATC
CGCGGTGTGG CCGAGGCGTT CGACCAATGG GCTGCCCAGG GCTGCACCGG ATGGTCGGCG
CGTGAGATCA TGCCGCTGTT CTCCGTGATC GAGGACGACC TCACTTATGG CGATCGCGAC
GGGCACGGCC AGGGCGGTCC GCTGCCGGTC TATCGGGCGC CGGCGGACCA GTGGGGGCCG
ATCGACGGTG GCTTGCGCGA TGCGGCGCTG GCGAGCGGCT ATCCCTGGTG CGACGACCTC
AACGGGCCCG ATGGCGAGGG CGTCGCCTGC TATCCCATCA ACAGCCGCAA CGGCCGCCGC
ATCTCGACCA ACGAAGCCTA TCTGGAGCCG GCGCGAGGCC GTTCGAACCT GGAGATCCGC
GGCGGCGCGC TGGTCGATCG TGTCCTGATC AGCGATGGCC GCGCGACCGG CGTGCGCGTG
CTTCTCGACG GCGAGGGCGC CAGGGAGATC GCGGCGCGCG AGGTCGTGCT ATGCGCCGGG
GCCATCCACA GCCCGGCGAT CCTGTTGCGT TCGGGCCTTG GACCCGCGGC CGAGCTGCGG
CACATGGGCA TCGCCGTGTT GCGCGATCTG CCGGTGGGAC GGCACTTCTT CGATCATCCC
TTGTTCCGCA CCACTATCCA GCTGCGCGAG GCGCTGCGTC CGACCGACCG CGACACGCGC
CACACCAATT GCTGCGTGAC CTATTCGTCC GGCTTGGCCG AGGGCGGCAA GCGCGACATG
ATCCTGATCG CGTTCAACCA CCGTGGCATC GGCGTGCCCG GCGCGATCGG CGCCGGCCTC
TTCAACGCCT TCTCGCGCGG CACGCTGAAG CTCGCCTCGC CTGATCCCTC CATCGATCCG
ATCGTGGACG AGAATATGCT CGCCGATCCC CGCGACATCG CGCGGATGCG GGACGCGGTG
AAGCGGCTGG CCGTGATCAC GCAGCAGCCG GCGCTACAGG GTATCGCCGA TTGGATCCGC
CTCGGCGATA CCGAACTCAC GCTGCCGCAG GCGGCCGCGC TGCCGGATGC CGAGCTCGAC
GCGCTGCTGC GCCGGGTGAC CGGCGATATT CAGCATGCCG CCGGCAGCTG TCGCATGAGC
GGCTTCGCCG ACGCCGATGG CGTCGTCAAT CCCGACGGGA CTGTCAAGGG GATCGGCGGC
CTGCGCGTCG CCGACGCCTC GATCATGCCG GCCGATTGTC GTGCCAACAC GCATTTCACC
ACGGTCGTGA TCGGGGAAGC GATCGCGCGG ATGATGCGGA AGAGGACGTA A
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| Protein sequence | MYDLIVVGGG SAGAAVAARL SEQPERRVLL LEAGADWRAD EVPWEIATPN PIPIIHDRAF
QEKWQWPQLM SRRVAGQEMR FYWRGKGLGG SSMMNGQIAI RGVAEAFDQW AAQGCTGWSA
REIMPLFSVI EDDLTYGDRD GHGQGGPLPV YRAPADQWGP IDGGLRDAAL ASGYPWCDDL
NGPDGEGVAC YPINSRNGRR ISTNEAYLEP ARGRSNLEIR GGALVDRVLI SDGRATGVRV
LLDGEGAREI AAREVVLCAG AIHSPAILLR SGLGPAAELR HMGIAVLRDL PVGRHFFDHP
LFRTTIQLRE ALRPTDRDTR HTNCCVTYSS GLAEGGKRDM ILIAFNHRGI GVPGAIGAGL
FNAFSRGTLK LASPDPSIDP IVDENMLADP RDIARMRDAV KRLAVITQQP ALQGIADWIR
LGDTELTLPQ AAALPDAELD ALLRRVTGDI QHAAGSCRMS GFADADGVVN PDGTVKGIGG
LRVADASIMP ADCRANTHFT TVVIGEAIAR MMRKRT
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