Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6606 |
Symbol | |
ID | 5155224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6883673 |
End bp | 6885547 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640561301 |
Product | putative Phage / plasmid primase P4 |
Protein accession | YP_001242415 |
Protein GI | 148257830 |
COG category | [R] General function prediction only |
COG ID | [COG3378] Predicted ATPase |
TIGRFAM ID | [TIGR01613] phage/plasmid primase, P4 family, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAACC ACGACGACGA CAACGTGCCA CCGCACGAGC AAATCGCGGC ATGGATCGAG GGCGATCACG ACGCCGATCT CTCGGGCTTC GCCGCCGCCT CCTATGCCCC GCACCCCGCC GATGGGGGGT CCAATTTTGA AGGGGCAGGC GAGGAGGATG TCGCGCCGGC TGATGACGAG CGGCCCGCCG ACGCCGATAC GTTGCCGCGC GAAATCATCG TCGCGTGCTC GCACGAGCCG CAAAACGACA CCGGCAACGG CAAGCGCTTG TTGCAATGGT TCGGCGCCGA TCTCGTGCAT GTGCGTGATA TGGGCTGGCA CGCGTGGGTC GGGACGCATT GGGAACGCGA GGGCGGGATC GAGGCGGCAA CACGTTGCGC GCAAAAGGTG GCCGAGCGCA TCGTGCTTGA GGCCGACGTG ATGGCCGCGA CACCGAACGA ACAGAAGGCC ATTGACGCCG CGAGCCAAGC CCGAGACGCG GCGGGAGCGA TCGAGGCAGC CAAGGGCGCC GAGGCGCGCA AAGATCAGCG CTGGCAAATG CTGATGCGTG TTGTGGCCGC CGGCGAGGCC GCGCAAACCG CCTTGGCGAG CCGCCAAGTC GCCCGCCGCA AATACGCGAT CTCAAGCGGC AACGCGGCCA AGGTGCGCAA CATGCTCGAT CAGGCGATGC CGCATCACAC GATCGAGATC GACAAACTCG ACGCTGATAA GCTGGCGTTC AACGTGCGCA ACGGCACGCT CTGCTTTGTC GCCGACGAGA TGCCCGATCC CGACGCGAGC GATCACTCTA ACCAGGTGCT CAAGAGGTGG CGCGTCGAGT TTCGTGAGCA TAACCGTGCG GACTACATGA CAAAGGTCGC GCCGGTTGAC TATGATCCGA AAGCGAAGTG CCCGACGTTC GATGCCTCGT TGCGGCGGTT TCAGCCGAGC GCGGACATCA GGCGGTTTTT GCAGCGCTAT CACGGCTATG CTTTGACCGG CCTCACGGGC GAGCAATGCT TGATCTTCAA CTATGGTGGC GGATCGAACT GGAAATCGAC GTTTGTCGAA CTGATGTGCC GCATCAGCGG CCCATACGCG CAAACGATCC CGTTCGAATC GATCTCGGGC GACGTGCAAA AGAGCGGATC GCAGGCGTCC CCGGAGTTCG CGCGCTTGCC CGGTTGCCGG CTGTTGCGCG CCGGCGAGCC CGATCCGAAC GTGCAATTCA AAGAGGGGCT GATCAAGTCA TTAACAGGCG GCGAGCCGAT GCTCACGCGG GCTAATTTCA AGGACTTTTT CGAGTTCCGG CCCGACTTCA AGATCGTGCT ATCAGGTAAT CACAAGCCGA AAATCTCCGG CGTCGATCAC GGCATTTGGC GCCGTATCAA CCTCGTGCCT TGGGGGATCA CGATCGCGGA TCACGAAAAG CGGCCGATGC CCGACGTGCT CGCCGAGCTA ATGGCCGAGG CGAGCGGCAT CCTCAATTGG CTCGTCGCCG GCACGCTCAA CTACTTGAAC GGCGGATTGA AGCCGCCGCC CGAGGTTGTC GCGGCTACTG CGGCCTATCG TGAGCGTATG GACCCGGTGG GCGCGTTTGT CGGGCAATGT GTCACGGTGT TGCCGCCGCC GGCCGCGCAC GCCGGCGCGG CGTTCGTGCC GGCGCGGCAG ATGTACGGCG CCTTTGTCGC GTGGTGCTCG GTCAACGAGC AAAAGCCATG GGGCGAAAAG GCGTTCGCCG GCGTGATGGA AGAAAAGGGG TTTGAGCGGC ACCGATCCAA CGCCGGCATG CGCTACCTGA ATGTGCAGCT GCATGACGTG CCCGAGCGCG ACGGCATGGG CCGAGACGAC GTTCCGCCGC ATCCTGGCGC CGACGACGCG CCCGTTCCCG TGTAG
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Protein sequence | MTNHDDDNVP PHEQIAAWIE GDHDADLSGF AAASYAPHPA DGGSNFEGAG EEDVAPADDE RPADADTLPR EIIVACSHEP QNDTGNGKRL LQWFGADLVH VRDMGWHAWV GTHWEREGGI EAATRCAQKV AERIVLEADV MAATPNEQKA IDAASQARDA AGAIEAAKGA EARKDQRWQM LMRVVAAGEA AQTALASRQV ARRKYAISSG NAAKVRNMLD QAMPHHTIEI DKLDADKLAF NVRNGTLCFV ADEMPDPDAS DHSNQVLKRW RVEFREHNRA DYMTKVAPVD YDPKAKCPTF DASLRRFQPS ADIRRFLQRY HGYALTGLTG EQCLIFNYGG GSNWKSTFVE LMCRISGPYA QTIPFESISG DVQKSGSQAS PEFARLPGCR LLRAGEPDPN VQFKEGLIKS LTGGEPMLTR ANFKDFFEFR PDFKIVLSGN HKPKISGVDH GIWRRINLVP WGITIADHEK RPMPDVLAEL MAEASGILNW LVAGTLNYLN GGLKPPPEVV AATAAYRERM DPVGAFVGQC VTVLPPPAAH AGAAFVPARQ MYGAFVAWCS VNEQKPWGEK AFAGVMEEKG FERHRSNAGM RYLNVQLHDV PERDGMGRDD VPPHPGADDA PVPV
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