Gene BBta_6502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6502 
Symbol 
ID5155223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6777383 
End bp6778438 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content69% 
IMG OID640561201 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_001242317 
Protein GI148257732 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTCC TGACGCTGGA AGGTCTGACC AGGCTCTATG GTGATGTCGC TGCGGTCAGC 
GACGTCAGCC TCAGCGTCGC CAAGGGCGAG TTCGTCTCGC TGCTCGGCCC GTCCGGCTGC
GGCAAGACCA CGACGCTTCA GATGATCGCC GGCCTGGTCG AGCCGACATC GGGGCGCATC
ACGCTCGACG GGCGTGACAT CACCCATGAG AAGCCGGATC GCCGCGGCCT CGGCATTGTG
TTCCAGAGCT ATGCGCTGTT TCCGCACATG ACGGTGGCGC AGAACGTCTC GTTCGGGCTG
GAGATGCGCC GGGTGGCCAG GGCCGAGCGC GAGGCGCGCG TCAGACAGGC GCTGGCGCTG
GTGCAGCTCG CCGCGCTCGC CGACCGCTAT CCGCGCCAGT TGTCCGGCGG CCAGCGTCAG
CGCGTCGCGG TGGCGCGTGC GCTGGTCATC GATCCGCCGG TGCTGCTGCT CGACGAGCCG
CTGTCCAATC TCGATGCCAA GCTGCGCGAG GAGATGCAGT TCGAGCTACG CGGTATCCAG
CAGCGCGTCG GCACCACCAC GATCATGGTG ACGCACGACC AGGGCGAGGC GCTGTCGATG
AGCGACCGCG TGGTCGTGAT GGAGCAGGGC CACATCGTGC AGGTCGATGC GCCTTATCGG
CTCTATGAGA GCCCGGCCAC GTCCTTTATC TCCGCCTTCG TCGGCAAGAT GAACCGGCTA
TCCGGCGTCT GGCGTCCGGG CGGGGTTGAG ATCGGCGGCC GCCTGCTGCC CTGCAACGGC
GCTGGTCTGA GCGAGGGCGC CGCTGCCGTG CTGGCCATCC GGCCGGAGAA GATCGGCTTG
AAGGCGCCGG GCGCAGGCGT GCTCGACGGC CGCGTCAAAG GCCGCTTTTT TCTCGGCAGT
GCCTGGTTCT TCACCGTGGA GACGCCGGCC GGCCTGATCG GCGTGTCCCT GCCCAATGCC
GGCGAGGAGC CGGCGCGCGA GGGCGATGCC GTCGGACTCG ACTGGAGCAG CACCAGCGCC
AAGGCCGCGA AGCCGGAGGG AGCGCAGGGG GCATGA
 
Protein sequence
MGFLTLEGLT RLYGDVAAVS DVSLSVAKGE FVSLLGPSGC GKTTTLQMIA GLVEPTSGRI 
TLDGRDITHE KPDRRGLGIV FQSYALFPHM TVAQNVSFGL EMRRVARAER EARVRQALAL
VQLAALADRY PRQLSGGQRQ RVAVARALVI DPPVLLLDEP LSNLDAKLRE EMQFELRGIQ
QRVGTTTIMV THDQGEALSM SDRVVVMEQG HIVQVDAPYR LYESPATSFI SAFVGKMNRL
SGVWRPGGVE IGGRLLPCNG AGLSEGAAAV LAIRPEKIGL KAPGAGVLDG RVKGRFFLGS
AWFFTVETPA GLIGVSLPNA GEEPAREGDA VGLDWSSTSA KAAKPEGAQG A