Gene BBta_6497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6497 
Symbol 
ID5155143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6772913 
End bp6774055 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content70% 
IMG OID640561196 
Productoxidoreductase 
Protein accessionYP_001242312 
Protein GI148257727 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGGC GCATTGACTG CGATGTCGCG ATCATCGGCG GCGGCCTGGT CGGCAGTTCC 
GCCGCATTGG CGCTGCGCGG CATGGGCCTG TCCGTCACGC TGCTCGACAA GGGCTTTTGC
GGCGCGCAGG CGAGCGGCGT GAACTATGGC GGCGTGCGCC GGCAGGGCCG TCCGTCCGAG
CAACTGCCGC TGTCGCAGCG GGCGCATGCG ATCTGGCCGC GACTGCAGCA GCTGATCGGC
ATCGACGGCG AGTTCCTGCG CTCGGGCCAT CTCAAGCTCG CGCGCAGCGC CGACGACATG
GCGAGCCTGG AGCGTTACGC CGCCGAGGTC GCGCCGTTCG GGCTCGATCT CGAACTGGTC
GGACACAATC AGCTGCGCGA GCGCTTCGGC GTGATGGGCG ATCTCGTCGG CGGGTCGTTC
TGTCCCGGTG ACGGCCACGC CAATCCGCGG CTGGTCGCTG CGGCCTTCGC TGCGGCGGCG
CGCCGCGCCG GCGCCGAGGT GCTGGAAAAC ACGGAAGTCG CCGGCGTGAG CAGGACGTTC
GAGGGCTTTG CGCTCGAGGC CGGCGATGTC GCCGTCACCG CCCGCAGCGT CATCAACAGC
GCCGGCGCCT GGGCCGACAG ATTTGCGCGC GCGTTCAACG AGCCGGTGCC GCTGGAGCGG
ACTTATCCCT CGATGATCGT GACCGAGCCG CTCGATCCGT TCCTGTCCGT CAATATCGGC
ATCGAGGGCG GCGGCATCTA TGCGCGGCAA GTTGCGCGCG GCAATGTCGT GGTCGGGGGC
GAGCGCGCCA CGCCGCTCGA CAATCCCGAC TACTCGCGCC CGCACAGTGA TGGCGCTCTT
ACCATCATGC AGCGGGCCAG CGAATTGTTC GGGCCGTTGC GCCATGCGCA GGCGATCCGG
TTCTGGAGCG GCACCGAGGC GACGATGCCC GACCGCAATC CCGTGCTCGG CCCGAGCGCG
ACGACGCCGG GTCTCATTCA TGCCTTCGGC TTCTCCGGCG CCGGCTTCCA GATCGCGCCG
GGTGTCGGCG AGGTGCTGGC CGAGCTGGTG CGCGATGGCC AGACCGCGAC GCCGATCGAC
GCCTTCGCGA TCACCCGTTT CTCACCCGCA TCGCAGCCGG GCGGTGCTCT CAAGCAGCAA
TGA
 
Protein sequence
MTRRIDCDVA IIGGGLVGSS AALALRGMGL SVTLLDKGFC GAQASGVNYG GVRRQGRPSE 
QLPLSQRAHA IWPRLQQLIG IDGEFLRSGH LKLARSADDM ASLERYAAEV APFGLDLELV
GHNQLRERFG VMGDLVGGSF CPGDGHANPR LVAAAFAAAA RRAGAEVLEN TEVAGVSRTF
EGFALEAGDV AVTARSVINS AGAWADRFAR AFNEPVPLER TYPSMIVTEP LDPFLSVNIG
IEGGGIYARQ VARGNVVVGG ERATPLDNPD YSRPHSDGAL TIMQRASELF GPLRHAQAIR
FWSGTEATMP DRNPVLGPSA TTPGLIHAFG FSGAGFQIAP GVGEVLAELV RDGQTATPID
AFAITRFSPA SQPGGALKQQ