| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6476 |
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| Symbol | |
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| ID | 5149429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6746398 |
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| End bp | 6747348 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640561175 |
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| Product | putative oligopeptide ABC transporter (permease protein) |
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| Protein accession | YP_001242291 |
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| Protein GI | 148257706 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.348696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCT TTCTGCTGCG GCGATGCCTG ACCTTGCTTG CGACCCTTGT CGGCGCGTCG
CTGATCATTT TCCTCGTGCT CGACGCGTTG CCGGGGAATG CCGCCCAGAT GCTGATGGGC
GCGGATGCCT CGCCGGACGC TGTCAGGGCC CTGACCGTCA AGCTCGGGCT GGATCAGCCG
CTGGCGCTCC GCTATCTGCA TTGGCTCCGC GGGCTCGTGG TCGGTGATCT CGGCAACAGC
TATGCCTATG GCACGCCGGT GGCCGAACTG ATCCGCGAGC GGCTGGCGAT GACCATTCCG
CTCGCGATCC TCGCGATGCT GCTGACGACG GTGCTGGCGC TTGCGGCCGG AATCTATACG
GCGGCCCATC ATAACCGGCT GGGCGATGTC GGCGTGATGT CGCTGACCCA GATCGGCATC
GCGCTGCCCA ACTTCTGGTT TGCGATCCTG CTGATCCTCT TGTTCGCGGT GAAGCTGCAA
TGGCTGTCAG CCGGCGGCTT CCCCGGCTGG GAGGACGGCA TCTGGCCCGG ATTGCGATCG
CTGCTGCTGC CGGCGGTGGC GCTCGCGGTG GTGCAGGCGG CGATCCTGGC GCGGGTGACG
CGCTCGGCGG TGCTCGACGT GCTGCGCGAG GACTTCGTCC GCACGGCGCG GGCCAAAGGG
CTGACGAAGC GCGAGGTGCT GTGGCAGCAC GTGCTGCGCA ACGCGATGAT CCCGGTGCTC
ACCGTGATGG GCCTGCAATT CGCCAATCTC CTGGCCGGCA CCATCGTGAT CGAGAACGTG
TTCTATCTGC CGGGCCTCGG GCGGCTGATC TTCCAGTCGA TCGCCAACCG CGACCTGATC
GTCGTGCGCA ACTGCGTCAT GCTGCTCGCG GGCATGGTCA TCATCGTCAA CTTCGTGGTC
GACGTCCTCT ATGCGGTGAT CGATCCGCGC ATCAAGGTCC ACGAGCTGTG A
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| Protein sequence | MSVFLLRRCL TLLATLVGAS LIIFLVLDAL PGNAAQMLMG ADASPDAVRA LTVKLGLDQP
LALRYLHWLR GLVVGDLGNS YAYGTPVAEL IRERLAMTIP LAILAMLLTT VLALAAGIYT
AAHHNRLGDV GVMSLTQIGI ALPNFWFAIL LILLFAVKLQ WLSAGGFPGW EDGIWPGLRS
LLLPAVALAV VQAAILARVT RSAVLDVLRE DFVRTARAKG LTKREVLWQH VLRNAMIPVL
TVMGLQFANL LAGTIVIENV FYLPGLGRLI FQSIANRDLI VVRNCVMLLA GMVIIVNFVV
DVLYAVIDPR IKVHEL
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