| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6446 |
|---|
| Symbol | |
|---|
| ID | 5154753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 6715430 |
|---|
| End bp | 6716335 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640561146 |
|---|
| Product | putative Alpha/beta hydrolase, putative protoporphyrin IX magnesium chelatase bchO-like protein |
|---|
| Protein accession | YP_001242262 |
|---|
| Protein GI | 148257677 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | [TIGR03056] putative magnesium chelatase accessory protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.606393 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA AGCCGAACTG GAGCGTCGAC GGCAAGGACT GGCCCAACCG CGCGGCCAGC
CGCTTCGTCG ACGCTGCCGG CCTGCGCTGG CACGTGCAGA TGATGGGCGA GGGGCCGGTC
GCGCTGCTGG CGCATGGCAC GGGGGCCGCG ACCCATTCCT GGCGCGATCT TGCGCCGCTG
CTCGCGCGGC ACTTCACCCT GGTCGCGCCG GATCTCTCCG GCCACGGCTT CACCGCGACG
CCGCACTGGC AGCGGCTGTC GCTCGACGGC ATGTCGCGCG ATCTCGCAAT CCTGTGCGAA
CGGCTTGCGG TCCAGCCTCA GATCGCGATC GGCCATTCGG CCGGTGCTGC GATCGTCACC
CGCATGACCA TCGATGGCCT GATCGCACCC CGGCTGATCG TCAGCCTCAA CGGCGCCTAT
CTGCCGTTCG GCGGCGTCGC CGCGCAGGTC TTCTCGCCGC TCGCCAAGAT GATGGCGCTC
AATCCGCTGG TGCCGCGGCT ATTCGCCTGG CGCGGCCGCG ATCCGGCGGC GGTGCATCGG
CTGCTGAAGG GCACCGGCTC GACGCTCGAT GCCCATGGCG AGCGGTTCTA TCGCCGCCTC
GTCGGCAGCC CTGGCCATGT CGGCGCCGCG TTGGAGATGA TGGCGAATTG GGACCTGCAT
CCGCTGCTGC GCGACCTGCC GCGGCTCAAG ACGGCGCTGT TGCTCGTGGC TGCATCGCAT
GACCGGGCCA TCCCGCCCGA CGTGGCCCTC CGCGTCAAGC AATTGGTGCC GCAGGCTCAG
CTCGAACTCA TTGATGGGCT TGGCCATTTG GCCCATGAGG AGCAGCCGGC GCGGATCGCG
GCGCTGATCA TCGCTGCGGC CGAGAGAGCC GGCGTGCTCG CAGTGCAGCA GGAAATGTCC
AGTTGA
|
|---|
| Protein sequence | MSDKPNWSVD GKDWPNRAAS RFVDAAGLRW HVQMMGEGPV ALLAHGTGAA THSWRDLAPL
LARHFTLVAP DLSGHGFTAT PHWQRLSLDG MSRDLAILCE RLAVQPQIAI GHSAGAAIVT
RMTIDGLIAP RLIVSLNGAY LPFGGVAAQV FSPLAKMMAL NPLVPRLFAW RGRDPAAVHR
LLKGTGSTLD AHGERFYRRL VGSPGHVGAA LEMMANWDLH PLLRDLPRLK TALLLVAASH
DRAIPPDVAL RVKQLVPQAQ LELIDGLGHL AHEEQPARIA ALIIAAAERA GVLAVQQEMS
S
|
|---|
| |