| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6438 |
|---|
| Symbol | bchC |
|---|
| ID | 5155339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 6706577 |
|---|
| End bp | 6707518 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640561138 |
|---|
| Product | 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
|---|
| Protein accession | YP_001242254 |
|---|
| Protein GI | 148257669 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCGA TCGCCGTGGT GCTGGGGAGG CCGAGGGAGT TGTCGCTGCA GCAGCTGCAG
CTGGCGGATG CCCCGGACTG TCTCACCGTC GACATCGAAT GGAGCGCGAT CAGCACCGGC
ACCGAACGGC TGCTGTACGA AGGGCGCATG CCGTCCTTCC CGGGCCTGGG CTATCCGCTC
GTGCCGGGCT ACGAGGCTGT CGGCCGCATC GCGCAGGCTG CACCTCATTC GGGTTTTCGA
AAGGGCGAGC GCGTCTTCGT GCCGGGCGCG GCGCGCTGCT TCGGCGAGGT GAGGAGCCTG
TTCGGCGCCG CAGCCTCACG CCTCAACGTT CCTCCGCAGC GCGTGGTCGC GATTGACGAG
TCCATCGGCG AGCGCGGCGT GCTGCTCGCG CTCGCGGCCA CCGCCTATCA TGCGCTGACG
ATCGGCGGCG ACGGCCAGGC CGAATGCGTG GTCGGCCATG GTGTGCTCGG TCGTCTGCTG
GCGCGGCTGA TCATCGCAAT GGGTGGGGAT CCGCCTGTGG TGTGGGAAAG CAATCCGGAG
CGCGCCGCCG GCGCGACCGG TTATCGCGTC ATCGATCCCG CGACTGATAC CCGTCGCGAC
TATCGCCTGA TCTTCGACGC CAGCGGCGAT GCCGGGCTGC TCGACAGTCT CATTGCTCGC
TTGGCCCCTC GGGGCGAGAT CATCCTCGCC GGCTTCTACA GTGCGCCGCT GACCTTCTCC
TATCCGCCGG CCTTCATGCG CGAGGCGGCG ATCCGCGTCG CCGCCGAATG GAAGCATGAG
GACCTGCTCG CGGTGCGCAA TCTGATCGAC ACCGGTCGGC TGTCGCTGGA CGGGCTGATT
ACGCATCACG CCGACGCTTT GTCGGCGGAG AGCGCCTACC GGACCGCATT CGACGATCCG
TCATGTCTCA AGATGGTCTT GGACTGGAGA GCTGCCCCAT GA
|
|---|
| Protein sequence | MDAIAVVLGR PRELSLQQLQ LADAPDCLTV DIEWSAISTG TERLLYEGRM PSFPGLGYPL
VPGYEAVGRI AQAAPHSGFR KGERVFVPGA ARCFGEVRSL FGAAASRLNV PPQRVVAIDE
SIGERGVLLA LAATAYHALT IGGDGQAECV VGHGVLGRLL ARLIIAMGGD PPVVWESNPE
RAAGATGYRV IDPATDTRRD YRLIFDASGD AGLLDSLIAR LAPRGEIILA GFYSAPLTFS
YPPAFMREAA IRVAAEWKHE DLLAVRNLID TGRLSLDGLI THHADALSAE SAYRTAFDDP
SCLKMVLDWR AAP
|
|---|
| |