| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6380 |
|---|
| Symbol | |
|---|
| ID | 5154216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 6640527 |
|---|
| End bp | 6642317 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640561082 |
|---|
| Product | putative two-component sensor histidine kinase |
|---|
| Protein accession | YP_001242198 |
|---|
| Protein GI | 148257613 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCG GAACAGCATC GCGCATGCGG GCGCTCTATC GCGAGCGCAT CCATCTCTTC
TTCGGCACGC GGACCCTTCC TTATCTCGGC GGCATCCGCG TTCTCCAGGC GATTTCGACA
AGTGGCGCGG CGTCCGCCGG ACTGCTCGTC TGGCTGTTGT GCGACCTGTC GCCGGTCCGG
GCGGCGATCT GGACCTTTCT CGTCGTGCTG ACCGAGTGCC TCATCACCAA CATCAACGAC
GCGTTCCGCG TCGTGTGCCC CCCGGACGAA ACTCTGTGGC GCTGGGGCTG GGCCAAGGCG
GCGTTGTTCG GTCTCAACGC GTTCGCCTGG TCGCTCAGTC CTCTGCTTCT CCACGTCGAC
GGTGCTCCCG CATCGGTGCT GTTGCCGCTG ACCGCCGTCA TCTTCTTCGT GACGAGTGCG
ACGTGGATCG TCGGAGCCGA CTATACGCCG AGCATGTGGA TCGTGATGGT GGCGGCGATC
GTTCCGGCGG CGCTGTCGTT CCTGAGCTTT GATGGCGAGC TCGAGCGGGT GGCCGGCATC
ACCCTCCTGG CGCTGTTGCC CTTCGTCCTG GCGACCGGTA CCAAGGCGGC GAAAAAGGCG
GAGGCTGCGA TCAACATCCG CCTCGACATC ACCGAACTCC TCGACGTCAA GGCGCGGCAG
GCGCAGCAGA TCGAGGAGCT GTTCGCGGAG AGGACCCGCT TCTTCAGCGC GGCCAGCCAC
GATCTGCGGC AGCCGCTGAA CGCGATGGGG CTGTATTTCG AACTTCTCGC ACGCTCGCCC
GATCAGGAGG ACCGCAACGA GATCATTGCG CGGCTGCAGG ATTGTGCGAC GAGCCTGCTC
CGGCAATTCG ACGCGATCAT GGGCGTGTCG GCCACTGATG CCGATATCAG GAACGCGAGC
GTCAGGGCCG TGCCTGTCCA TGAGATCTTT CTCAGCGTGG CTTCGACGCT CGATCTCGAG
GCCCGGCGCA AGTCGTTGCG CCTGCGGGTG CGGCCGTCCG ATCTGTGGTG CTCGGTCGAT
CCGGCTCTGC TCGAGCGTGC TCTGCTCAAC CTCGTCGGCA ATGCGATCAA GTACACCGAG
ACGGGCGCCA TCCTCATCGG CGCACGCCGC CGCGCCGGAG CTGTGAGAAT CCAAATCGTC
GATACCGGGA TCGGCATCGA GCCTCGCCAT CTCAACGCGA TCTTCGATGA TTTCTTTCAG
GTCGGAAATC CCGAACGCAA CCGCGACAGG GGGCTTGGCA TCGGGCTCGC CATCGTTCGG
CGCCTCTGCA AGGCGATGGA CTGGCCGCTC GAGGTGAAGT CGGTGATCGG ACGCGGCACC
AGCTTCAGCC TTACCGTGCC GATGGCGGAT GCCGCACCGG CAAGCGTCGA CACAGATTCG
ATGAATCGGG AAATAAGCGT GCCGGATCGG TCGGATCAGC CGGGTGTGCT CGTGATCGAC
GACGACGCGA CGACACGCGA TTCGCTCGGT CGGCTGCTGA CCAATTGGGG CTATGAATGC
GCGCCCTTCG AGGGCGGAGC GCCTGCACTT CGTTTCCTGG GCCAGGCGGC GGCACGAAAG
CGATGGCTCG TCCTGCTCGA CTACCGCTTG GCCGGCACGG AAACCGGGCT CAATATTGCT
GACAAGATCA TCGCGGCTTA CGCGGACCGC ACGCGGCTGG TTCTGATGAC CGGAGACATC
GGTCCGGAGA TCGCGGAAGG CGCCCGTCAG CGCGGCGTGC TGCTGTTGCG CAAGCCGGTG
CAGCCGATCC GGCTCAGCGC GCTTCTGAGC TCGGACATGG CAGCGGAATA G
|
|---|
| Protein sequence | MPAGTASRMR ALYRERIHLF FGTRTLPYLG GIRVLQAIST SGAASAGLLV WLLCDLSPVR
AAIWTFLVVL TECLITNIND AFRVVCPPDE TLWRWGWAKA ALFGLNAFAW SLSPLLLHVD
GAPASVLLPL TAVIFFVTSA TWIVGADYTP SMWIVMVAAI VPAALSFLSF DGELERVAGI
TLLALLPFVL ATGTKAAKKA EAAINIRLDI TELLDVKARQ AQQIEELFAE RTRFFSAASH
DLRQPLNAMG LYFELLARSP DQEDRNEIIA RLQDCATSLL RQFDAIMGVS ATDADIRNAS
VRAVPVHEIF LSVASTLDLE ARRKSLRLRV RPSDLWCSVD PALLERALLN LVGNAIKYTE
TGAILIGARR RAGAVRIQIV DTGIGIEPRH LNAIFDDFFQ VGNPERNRDR GLGIGLAIVR
RLCKAMDWPL EVKSVIGRGT SFSLTVPMAD AAPASVDTDS MNREISVPDR SDQPGVLVID
DDATTRDSLG RLLTNWGYEC APFEGGAPAL RFLGQAAARK RWLVLLDYRL AGTETGLNIA
DKIIAAYADR TRLVLMTGDI GPEIAEGARQ RGVLLLRKPV QPIRLSALLS SDMAAE
|
|---|
| |