| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6344 |
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| Symbol | dapA |
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| ID | 5149948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6606698 |
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| End bp | 6607627 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640561050 |
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| Product | dihydrodipicolinate synthase (DHDPS) |
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| Protein accession | YP_001242167 |
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| Protein GI | 148257582 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.232972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0384677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGCG AAGCGGCGCG CGGATGGCTC GCCGGCGCGA TCGCCGATAT CCCGACGCCG
TTCGATCGGA GCGGGGCGTT GGACATCGCA GCCCTCGCCA GATTGTGCGA GCGGCAGATC
GAGGCCGGCG CGAGCGCGAT CCTGGTCTGC GAGACCGCGG GCGAAGCGTC CACGCTCACT
GCAGCCGAGC GCGAGGCCGT GATCCGCACG GCCGTGACCG TGGCCTGCAA CCGGATCCAC
GTCATCGCCG GTGCCGGATC CAATTCGACG CTGCAGGCGG TGCAGAACAC GCGGCAGGCG
GCCGCCGCGG GCGCCGACGC AATCATGTCG GTGGTCCCCT ATTATAACCG GCCGACCGCG
GAGGGGATCT ACGCGCATTT CCGCGCGGTC GGCGACGCGA CGGCCCTGCC GATCATCCTG
CATGATTGTC CGGCGCGCAC GGGACGCGGA CTGCCGGACG AGACGCTGAT CCGCCTGGCA
CAGTGGGCGC AATTCATCGG CCTGCGCGAC AGCACCGGCG ACATCGCGCG TGTCGTGCAT
CTGCGCGCGC GCGTCCCCCT GGGCTTCCGT TTGCTGGGCG ATGACCTCAC GGCGCTGGCT
TACGCCGCCG CGGGCGGCGA TGGCTGTTTC TCGCTGGCAG CAAATATCGC ACCGCAGCTC
TGCAATGCCC TCCTCGAGAG CTGCCGGCGC GGCCGCTGGC GCACAGCGCG ACGGCTGCAT
CAGCAATTGC TGCAACTGAG CGAGGCGACC AGCCGCGAAC TGCCGGCAGC ATTGAAATAT
GCCCTCAGCC TGCAGGGCCT GGCTATGCCG CACGTTCGCC TGCCATTGAC CGAGCTCGAC
CAGCCCGCCC AGGCCATGGT GGCGCAAGCG ATGGCGGAAC TGAACGCGTG GCTTGCCACA
GCGCCCGGAA TACCAGCCTG CCAATCCTGA
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| Protein sequence | MQREAARGWL AGAIADIPTP FDRSGALDIA ALARLCERQI EAGASAILVC ETAGEASTLT
AAEREAVIRT AVTVACNRIH VIAGAGSNST LQAVQNTRQA AAAGADAIMS VVPYYNRPTA
EGIYAHFRAV GDATALPIIL HDCPARTGRG LPDETLIRLA QWAQFIGLRD STGDIARVVH
LRARVPLGFR LLGDDLTALA YAAAGGDGCF SLAANIAPQL CNALLESCRR GRWRTARRLH
QQLLQLSEAT SRELPAALKY ALSLQGLAMP HVRLPLTELD QPAQAMVAQA MAELNAWLAT
APGIPACQS
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