Gene BBta_6331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6331 
Symbol 
ID5152647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6593821 
End bp6594702 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content65% 
IMG OID640561038 
Producthypothetical protein 
Protein accessionYP_001242155 
Protein GI148257570 
COG category[S] Function unknown 
COG ID[COG1273] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02772] Ku protein, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.120205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCCC GCGCCTATTG GAAAGGCTCG CTCAAACTTT CGCTCGTCAG CTGTCCCGTC 
GTGCTCTATC CGGCGTCGAC CTCGGTGGAG AAGACGCGCT TTCACCTGAT CAACCGCGAG
ACCGGCAACC GGCTGAAACA GCAGATGGTG GATGCCGAGA CCGGCGACAT CGTCGAGGGC
GAGCAGAAGG GCCGCGGCTA CGAGCTGGCC AAGGGCCAGT ATGTCGAGAT CGAGCCCGAG
GAGCTGGAGG CGGTGCGGAT CGAGAGCAAC CACACCATCG ACATCGACAG CTTCGTGCCG
CGCGAGGAGA TCGACCAGCG CTATCTCAAC CACCCCTATT ACATCGCCCC TGACGGCAAG
GCCGCGCTCG ACGCTTTCGC CGTGATCCGC GACGCCATGA AGGACCGGGA CCGCATCGCC
CTGGCGCGCA TCGTGCTGAC GCATCGCGAG CACGTTATCG CTATCGAGCC GATGGGCAAG
GGCCTGCTCG GCACCACCCT GCGTTTTCCC TATGAGCTGC GCGACGAAGC CGAGTTCTTC
GACGACATCA AGTCGCCCCG GATCACCAAG GACATGATCG AACTGGCCAG CCACATCCTG
CAGACCAAGG CGGCGCATTT CGACCCGTCG GAGTTCAAGG ACCAGTATGA GACCGCGCTG
AAGACGCTGG TAAAGCGCAA GGCCGCGGGC AAGCCGATCA AGCTGCCGGA GCCGGAGCAG
CGCTCGGACA ATGTCGTCAG CCTGATGGAC GCGCTGAAGC AGAGTCTCAA GGGCAAGAGC
GGCCCCAAGG GGACGCGCGC CCCAGCGCGG CGGCCGAGCC CGCAGCGCCG CGCCGCGAAG
AAGGCGCATC GCTCGGCGGC GCGGCAGAGG AAGGCGGGGT GA
 
Protein sequence
MAPRAYWKGS LKLSLVSCPV VLYPASTSVE KTRFHLINRE TGNRLKQQMV DAETGDIVEG 
EQKGRGYELA KGQYVEIEPE ELEAVRIESN HTIDIDSFVP REEIDQRYLN HPYYIAPDGK
AALDAFAVIR DAMKDRDRIA LARIVLTHRE HVIAIEPMGK GLLGTTLRFP YELRDEAEFF
DDIKSPRITK DMIELASHIL QTKAAHFDPS EFKDQYETAL KTLVKRKAAG KPIKLPEPEQ
RSDNVVSLMD ALKQSLKGKS GPKGTRAPAR RPSPQRRAAK KAHRSAARQR KAG