Gene BBta_6215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6215 
Symbol 
ID5150071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6462094 
End bp6463305 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content63% 
IMG OID640560926 
Productputative ABC branched-chain amino transporter, periplasmic binding protein 
Protein accessionYP_001242044 
Protein GI148257459 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.947625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCTT CGGCGCAAGC CGTCGCCGCA GCCCTCGCGC TCGCGGCCCT CTGCGGAACC 
GCTCAGGCCC AGACGATCTC GGACGATGTC GTCAAGATCG GCGTGCTCAC CGACATGTCC
AGCCTCTATG CGGACGCGAC CGGCAAGGGC TCGCTGGTGG CCGTGCAGAT GGCGGTCGAG
GACTATGGCG GCAAGGTCAA GGGCAAGAAG GTCGAAGTCG TCTCGGCCGA TCACCAGAAC
AAGCCGGATG TCGGCGTCAA CATCGCCCGC AACTGGTATG ACAATGAGAA GGTCGATGCC
ATCTTCGACG TGCCAACCTC CTCGGTCGCG CTGCCGATCT CGGCGCTGAC CCGCGAGAAG
AACAAGATCC ACATCAATTC CGGCGGCGGT TCATCCGACA TCACCGGCAG CCAATGCTCG
CCCAACACGG TGCACTGGAC CTATGACACC TACGCGCTGT CGAACGTGGC GGGCAAGGCG
ATGGTCAAGC GCGGCGAGGA CACCTGGTTC TTCATCACCG CCGATTACGC GTTCGGCCAG
GCTCTGGAGC GTGACGCCGC CAATGTCGTG AAGGAGGCCG GGGGCAAGGT GCTCGGCGAC
GTGCGCCATC CGCTGAACTC GTCGGACTTC TCCTCCTTCG TGCTGCAGGC CCAGGCGTCC
AAGGCCAAGG TGGTGGGTCT CGCCAACGCC GGCGGCGATA CGCAGAACGC GCTCAAGCAG
GCGGCGGAAT TCGGCCTGGC GCAGAGCGGC CAGAAGATGA TCGCGCTCTT GATGGAGATC
ACCGACGTTC ACTCCCTCGG CATCAAATCG ACCGCCGGAC TGATCGTCAC CGATGCGTTC
TATTGGGACA TGAACGACGA GACCCGCGCC TTCTCCAAGC GCTTCAACGA CAAGGTCGGG
CACATGCCGA CCATGATCCA GGCCGGGCTC TATTCGGCGA CGATGCATTA CCTCAAGGCG
ATCGAGGCCA TCGGCACCGA CGAGGCGCCG AAGGTGATGG AGCAGATGCG CGCGACGCCG
GTGAACGATT TCTTCGCCAA GAACGGCAAG ATCCGCATCG ACGGCCGCAT GGTGCACGAC
ATGTATCTGT TCGAGGTCAA GAAGCCGGAG GAGTCGAAGG GCGACTGGGA CCTCTACAAG
CTGATCGCGA CCGTGCCGGG CGACGAGGCG TTCCGTCCGC TCGACAAAGG CGGCTGCCCG
CTGGTGAAGT GA
 
Protein sequence
MKPSAQAVAA ALALAALCGT AQAQTISDDV VKIGVLTDMS SLYADATGKG SLVAVQMAVE 
DYGGKVKGKK VEVVSADHQN KPDVGVNIAR NWYDNEKVDA IFDVPTSSVA LPISALTREK
NKIHINSGGG SSDITGSQCS PNTVHWTYDT YALSNVAGKA MVKRGEDTWF FITADYAFGQ
ALERDAANVV KEAGGKVLGD VRHPLNSSDF SSFVLQAQAS KAKVVGLANA GGDTQNALKQ
AAEFGLAQSG QKMIALLMEI TDVHSLGIKS TAGLIVTDAF YWDMNDETRA FSKRFNDKVG
HMPTMIQAGL YSATMHYLKA IEAIGTDEAP KVMEQMRATP VNDFFAKNGK IRIDGRMVHD
MYLFEVKKPE ESKGDWDLYK LIATVPGDEA FRPLDKGGCP LVK