Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6189 |
Symbol | |
ID | 5154667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6431312 |
End bp | 6431944 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640560901 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001242019 |
Protein GI | 148257434 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.304814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.805788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAGG TCGATCAGAA TACCACCCAT GCGCCACAGG ACGAGGACAC GTCGAAACGG CGGCAGATCC TGGATGGGGC GCGCGAGGTC TTCATGGAGC TGGGCTTCGA TGGCGCCAGC ATGGGTGAGA TCGCCCGCGC GGCGGGTGTC TCCAAGGGCA CCCTGTATGT CTACTTCACC GACAAGACCG CCTTGTTCGA AGCGATCGTC GAAGAAGAGA CGCGCACCGC TGTGCTGTTC AGATTCGATC CCGATCGCGA TATAGCGACC AATCTGACCG GCTTCGGCGA AGCCTATATC GCGCTGGTGT GCCGGCCGGG CGGCGGATCC GCGATCCGCA CCGTGATGGC GATCGCCGAG CGCATGCCGG ATGTCGGACG CCGCTACTAT GACCGCGTGC TCGAAGGCAC CATCAATTGC CTGACCACCT ATTTGCGCGG CCGGGTCGAG GCAGGGCAAC TGGCCATCGA CGATTGCCAG CTCGCGGCAT CGCAATTCCA CCTGATGTGC CAGGCGACCT TGTTCCTGCC CTTCATCTTC CAGGCCGAGC CGGCCCCCTC GCCCGAACGC ATCAGCAAGG TGGTGGCGAG CGCGGTTCGG ATGTTCCTCG CCAATTATGG CGTCAAAGGC TGA
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Protein sequence | MIEVDQNTTH APQDEDTSKR RQILDGAREV FMELGFDGAS MGEIARAAGV SKGTLYVYFT DKTALFEAIV EEETRTAVLF RFDPDRDIAT NLTGFGEAYI ALVCRPGGGS AIRTVMAIAE RMPDVGRRYY DRVLEGTINC LTTYLRGRVE AGQLAIDDCQ LAASQFHLMC QATLFLPFIF QAEPAPSPER ISKVVASAVR MFLANYGVKG
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