| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6121 |
|---|
| Symbol | |
|---|
| ID | 5151193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 6348045 |
|---|
| End bp | 6351821 |
|---|
| Gene Length | 3777 bp |
|---|
| Protein Length | 1258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640560835 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001241954 |
|---|
| Protein GI | 148257369 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.489927 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGACGA CCCTGCTCGG CTTGGCGATT GCCTTCATCC TTGCGCTCCT TGCTGCGCTG
ATCGGCCCGT TCTTCGTCGA CTGGAACCAG TTCCGGCCGC AGTTCGAGGC CGAGGCGAGC
AAGATCATTG GTGTGCCCGT GCGGGTCGCC GGTGCGCTGG ACGCACGGCT GCTGCCAACT
CCCACGTTGC GGCTCCGACA GGTCACGTTC GGCGGCGCCA ATCATCTGGG CAAGCTGCGC
GCCGACAAGC TGGACGTCGA GTTCAGCCTC GGCGATCTGA TGCGCGGGGA GTGGAAGGCG
AATGAACTCA CCATCGGCGG AATGGCCGCC GATCTCGGGC TCGACGCCAA GGGCCAGGTC
GACCTGCCGG CCGCCTCGGG CCGGTTCAAC CTGGCCGCGC TGGCGATCGA TCGCTTCAAT
CTCACCGGTC GGGTCGCTCT GCACGACGCC GCCAGCCGCT CGACCCTCGA GCTGACCGAT
ATCGTCTTCT CCGGCGACGT GCGTTCGCTG GCTGGTTCGC TGCGCGGCGA CGGTGCGGTC
TCGATCCGCG GCGCCCGTTT CCCGTTCCGG GTGTCGTCGA GCCAGGACAA GGAGTCCGGC
GGCCTGCGCG TCCACCTCAA TATCGACCCG GGCGAGCGTG CCGTCATCGC CGATGTCGAA
GGTCTGATCA GCTTTCCCAA CCGCTCGCCG CGGTTCGAGG GCGCGCTCAC GCTGTCTTCG
CCGCCCAAGG AGCAGGGCGA CGGCAAGGAC AAGCTCGCCG CGGGCGACCC GGCCAAGCCG
CAATCGGCCA ATCCGCCGTC CGCCAAGAGC AGCCCGGCCG TGGCAGCGGG CGCGACGCCG
TGGCGGATCG CCGCCAAGGT CGGAGGCGAC CAGGCCGCGG CCAAGCTCGA CCAGATCGAG
GTGACCTTCG GCGAGGAGGA TCGCTCACTC AAGTTCACCG GCAGCGGCGA CGTGCGGTTT
GGCGCCGCAC CGATGCTGCG CGCGACGCTG TCTGCGCGCC AGCTCGATGC CGACAAGCTG
CTCTCCGGTG GCGGCGATGT GAGGGACAGG CGCGCGATGG CGCCGGCCCG CGTCTTGCCG
GCTTTGCGCA ACTGGATTGC GCAGCTGCCG ACCCTGCCGC TCCCCGCCAA TGTGCAATTC
TCCACCGAGC AGATCATGCT GTCGGGCCGC CCGGTGCAGA ACTTCACCGC CGACCTGCAC
AACGAGACGA CGGCATGGAG CCTGGAAAAG GTCGATCTGC GCGCGCCCGG CGCGACGCAT
CTGACGTTCC GCACGATCGG CATCTCGACC GCGGTCACGT CCGGCTTCTC CGGCGCGCTC
GACCTTTCAT CATCGGAGCC TGACGCCCTG GTGGCCTGGA TGCAGGGCCG CAGCGATACC
ACCTACCGCA CCCAGCGTCC GCTGCGGCTG CGCGGCGATA TCAGCGTGGC GCCGGATCGG
GTGGCCATCG ATAGTCTGAA GGCGGACATT GACGGCGGGT CCGTCGATGG ACGCATCGCG
CTGATCACCA AGGCTGCCGG AGCGGGCTCC CGGCTGGAAA CGGCGCTCAA GGGTGACAGG
CTCGACCTCG ATGCTGCGCT GGCGGTGGCG CGTTCGCTCG CAGGAGCCTC GGGCGAGTGG
CCAACCGAGG CCAGCGTGGC GCTCGACATC GGCCGCGCCA AGATCAGCGG CCAGGAGCTC
AGTCCGCTCG CGACGCGCTT TTCCTACGAT CCCAAGACGA TCGCTCTCGA TCAGCTCAAA
TTCGGCCAAA GCGGCGGCGT CAGCAGCGAG GGCTCCGGCC GGTTCGATCG CGCCGACGCG
ACCGGACGGC TGGTCCTGAC CTCGATGGCC GGCTCGTTGA AGGAGATCAC GTCGCTGGTG
CAGCCGATCG CGCCGAGGAT CGCCGCTCGT TTCGATGCCT TGAGCATCCC CTCGGGCGCG
GCGCGGCTGA AGCTCACGCT CGATCTCGCC AAGGATCCGA CGAACCTCGA GCGCAGCCAG
GCGAAAGCCG TGCTCGATCT GGATGCGCCG CAGTTGAAGG GCTCGGCGAC CCTGACGGCA
AAGCCGTCGG CGGCAGCACT CCGCAGCTTC GAAGTCGATG CGATCGACCG TACCGAGCTC
GGCATCGAGA GCCGGCTGTC ATCTGAGCAG GGCCATCTGG TGCTCGCGCT GCTCGGCCTC
GACCGCTTTG CAGCGGTGGG CAACGGCCCG GCGCAGTTCG AAGCGAGCGT GAGCGGCAGC
TGGCGCGCGC CGTTGCGCGT CAATGCCAAG CTGTCCGGCG CGGGTCTCGA CGGCGACGCA
CAGGGGACGA TCGAGCCATG GGGAGAGTTC ACCAAGGCGA CGGCGAATCT GCGCCTGCGC
AGCGCCAACC TGGCGCCGCT GGTTGGGCTG AAGCCCCAGG AAAGCGCAGC CCAGAACGTC
CGGCTGTTCG GCCGGCTCGG TCTCTCCGGC ACCCGCGTGA CCCTCGACGA TATCGACAGC
ACGGTCGGCG GCTCGCGGCT CCGCGGTCGT CTCGCGATGA ACCTGGACGA TGAAAAGCAG
ATCGACGGCG AACTCGGCCT CGATGCGCTC GATGTCCCGC AGCTGTTTTC GGTGCTGGTC
GGCGCGGCCG GCCAAGACGC GGCCGCGCCG CTTGGCCCGG GCCTCTTGAA AGGCTGGCGC
GGGCGGGTGT CGTTCCAGGC TCTGAGCGGC GCTGTCTTGA ACGGCACCGA GCTGCGGCCC
CTCGGTGGCG CCGTCGCGAG CGACGGGCAG TCGCTGACGA TCGAAAATCT CAAGGGCAAG
CTCGGCGGCG GCGATGTGAC CGCGACCGTC GAGGCGCGTT CCAACGCCAA TGGGCTGGTT
CTGAACGGGC GCGTCGAGCT CGCGGGCATC GACGGCAACG CACTGCGCTA TCGCAGTCTG
AAGATGCCGG CCGGCAAGGT GTCGGCCCAG ATGGCGCTCG CCGCCGAGGG GCGCAGCGTG
CAGGGACTCG TGAGCGCGCT GTCGGGCAAT GGCACTGTCA CACTCGACAA TGCGGCGATT
CCAAATCTCG ATCCGCGGGC GTTCGATGCG GCCTTGCGCG CCGCCGATGC GGGACAGCTC
GGCGATGACG GCAAGCTCCG GCAGATCGTC GAGCCGGCGC TGAGCTCGGG CACGTTGTCC
ATTGCTTCGG CTCAGATCCC GTTCATCATC CGCGACGGCC GGCTGCGCGT CGGCGCCACC
CCGCTGGAAG CCCAGGGGGC GCGCGCGATC GTCTCCGGCG GCTTCGATAT CCCGGCCGAT
CAGGCCGACA TTCGCGCCAG CCTCAGCTCT AACACGGTCG GCAGCTCCAA CAGCCGGCCG
GAGGTTCAGC TGTTTGCGGT CGGCACGCCC GATACGCTGA CGCGCGCGGT CGACGTCACC
TCGCTGTCCT CCTGGCTTGC CGTGCGTGCG ATCGACCGCG AGACGCGCCG TCTGGACGCG
ATCGCGCGCG GCGAGGCGCC GCCGGCCTAT TCGTCGTCGA CGGCGTCGCT GCCGGGTGGT
CCGGATGTCG CGCCGGTCCC GCCCAATGCC GCCGACGTGC CGGTGCCCGG ACGTGATCCG
CGGCGCGATC CGCGCGCCAG GCTGGGCGGT CCGCGCGCGG CGGTGCCGCC GCTGACCGCG
CCGCTCTCGG CTCCCGCAAC GGCCCCTGCG CCGGCCGCCC CTGTGGCATC GAGCCAGCCG
CAGGTTGCTC CGCTGCCGCC GCCGGTCGAG ATCAAGCCTG CGCCCGGCGC GCTGCCGCCG
CGGCCCCGGC CCTTGCCGCG TCCGCCGGTC GTGTTGACGC CGCCGGGCAG CCCGTGA
|
|---|
| Protein sequence | MQTTLLGLAI AFILALLAAL IGPFFVDWNQ FRPQFEAEAS KIIGVPVRVA GALDARLLPT
PTLRLRQVTF GGANHLGKLR ADKLDVEFSL GDLMRGEWKA NELTIGGMAA DLGLDAKGQV
DLPAASGRFN LAALAIDRFN LTGRVALHDA ASRSTLELTD IVFSGDVRSL AGSLRGDGAV
SIRGARFPFR VSSSQDKESG GLRVHLNIDP GERAVIADVE GLISFPNRSP RFEGALTLSS
PPKEQGDGKD KLAAGDPAKP QSANPPSAKS SPAVAAGATP WRIAAKVGGD QAAAKLDQIE
VTFGEEDRSL KFTGSGDVRF GAAPMLRATL SARQLDADKL LSGGGDVRDR RAMAPARVLP
ALRNWIAQLP TLPLPANVQF STEQIMLSGR PVQNFTADLH NETTAWSLEK VDLRAPGATH
LTFRTIGIST AVTSGFSGAL DLSSSEPDAL VAWMQGRSDT TYRTQRPLRL RGDISVAPDR
VAIDSLKADI DGGSVDGRIA LITKAAGAGS RLETALKGDR LDLDAALAVA RSLAGASGEW
PTEASVALDI GRAKISGQEL SPLATRFSYD PKTIALDQLK FGQSGGVSSE GSGRFDRADA
TGRLVLTSMA GSLKEITSLV QPIAPRIAAR FDALSIPSGA ARLKLTLDLA KDPTNLERSQ
AKAVLDLDAP QLKGSATLTA KPSAAALRSF EVDAIDRTEL GIESRLSSEQ GHLVLALLGL
DRFAAVGNGP AQFEASVSGS WRAPLRVNAK LSGAGLDGDA QGTIEPWGEF TKATANLRLR
SANLAPLVGL KPQESAAQNV RLFGRLGLSG TRVTLDDIDS TVGGSRLRGR LAMNLDDEKQ
IDGELGLDAL DVPQLFSVLV GAAGQDAAAP LGPGLLKGWR GRVSFQALSG AVLNGTELRP
LGGAVASDGQ SLTIENLKGK LGGGDVTATV EARSNANGLV LNGRVELAGI DGNALRYRSL
KMPAGKVSAQ MALAAEGRSV QGLVSALSGN GTVTLDNAAI PNLDPRAFDA ALRAADAGQL
GDDGKLRQIV EPALSSGTLS IASAQIPFII RDGRLRVGAT PLEAQGARAI VSGGFDIPAD
QADIRASLSS NTVGSSNSRP EVQLFAVGTP DTLTRAVDVT SLSSWLAVRA IDRETRRLDA
IARGEAPPAY SSSTASLPGG PDVAPVPPNA ADVPVPGRDP RRDPRARLGG PRAAVPPLTA
PLSAPATAPA PAAPVASSQP QVAPLPPPVE IKPAPGALPP RPRPLPRPPV VLTPPGSP
|
|---|
| |