Gene BBta_6078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6078 
Symbol 
ID5154798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6301862 
End bp6303040 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content65% 
IMG OID640560790 
Producthypothetical protein 
Protein accessionYP_001241911 
Protein GI148257326 
COG category[S] Function unknown 
COG ID[COG5330] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAGCC CGCAGCGGAG CAGAAGCGCG GCCGCTGCGG CAATTCCGGA CCAGACGAGC 
GTGACCGTGT CTCAGCCAGA ACAGCTTCCC GATTCAGAAC ATTCGATCAT CTCCGAACTC
GAGGACGCGG TTCGCGGCGG CTCCTCCGAG AAGCGCGTCC ACACGCTCCG CCAAGTCACC
AACCTGTTCC TGCATGATGG CGAACGCCTC AGCGAGGAGC AGATCAAAGT GTTCGACAAC
GTGCTGTGCA TGCTGGTGTC CCGCGTCGAG ACGCGGGCGC GGGCCGAGCT CAGCAAGCAT
CTGGCGCCGG TCGATTACGC GCCGGTCGAC GTCATCCAGC GCCTCGCCCG TGACGACGAG
ATTTCGGTCG CCGAGAGCGT GCTGATGCAT TCGACCCGGC TGTCCGAACA CACCCTGGTC
GAGGTCGCAT CGACCAAGGG CCAGGACCAC CTGATGGCGA TCTCGAGCCG CCCGCATCTG
ACCGAGGCCG TCACCGACAT CATCGTCGAC CGCGGCGAAC GTCGCGTCAT CCGCAAGCTC
GCCAACAACC AGACCGCGCG CTTCTCCGAG ACCGGCTATT CCGGGATGAT GGCGCATGCC
GAGGATGACG ACGAACTGAC CGAGATCATC GGGCTGCGCG TCGACCTGCC GAACAAGCAT
TTGCGCGACC TCCTGCGCCG CGCCACCGAT TCGGTGCGCA CCAAGCTGAT GGCCTCCGCC
CCGCCGGCGC TGCAGAAGGA GATCAAGAAG GTCCTGAAGA CCATCAGCGA CGTCGCGCGC
AGCGATGGCG GCCTGGTCGG GCGCGACTTC ACGCTGGCCG AAGAGGCCGT CAAGCGCATG
AAAGGGCTGA ACGAGCTCAA CGACACCGCC ATTGCCTTTT TCGCCGAGAC CCGCCGCTTC
GGCGAAGTAG CGGCCGCGCT CGGCCTGCTC AACAACGTGC CGACCGAGAT GATGGCCAAG
GTGCTGGAAG GCCCGCGCAC CGACATCGTG CTGATCCCCT GCCGGGCGGC CGGGCTGATC
TGGCCCGCCG TCGCCAAGAT CCTGACTCAC CGCCCGATCA AGCACGCCAT CGACAGCGAG
ACGCTCAAGC TGGCGGAGCG CGATTACACC AGACTGTCGC TGGACACGGC GCAGCGCACG
CTGCGGTTCT GGATGGTGCA CAACAAGGTC GAGAAGTAA
 
Protein sequence
MPSPQRSRSA AAAAIPDQTS VTVSQPEQLP DSEHSIISEL EDAVRGGSSE KRVHTLRQVT 
NLFLHDGERL SEEQIKVFDN VLCMLVSRVE TRARAELSKH LAPVDYAPVD VIQRLARDDE
ISVAESVLMH STRLSEHTLV EVASTKGQDH LMAISSRPHL TEAVTDIIVD RGERRVIRKL
ANNQTARFSE TGYSGMMAHA EDDDELTEII GLRVDLPNKH LRDLLRRATD SVRTKLMASA
PPALQKEIKK VLKTISDVAR SDGGLVGRDF TLAEEAVKRM KGLNELNDTA IAFFAETRRF
GEVAAALGLL NNVPTEMMAK VLEGPRTDIV LIPCRAAGLI WPAVAKILTH RPIKHAIDSE
TLKLAERDYT RLSLDTAQRT LRFWMVHNKV EK