Gene BBta_6072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6072 
Symbol 
ID5154945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6295096 
End bp6296805 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content66% 
IMG OID640560784 
Producthypothetical protein 
Protein accessionYP_001241905 
Protein GI148257320 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTGA CTCCGAACCA CGAACCGATC ACCACGCTCG CAGCGGCGAG CGCGACGCGA 
TCTGCCGCCG TGCGGCTGTC GGCCGTCGCG GCACCGCATG TCGCGGCGCT GGCGCTGATG
CTGCACACCG AGACCGATTT CGGCTCTCGC CTCGGCTTCG TGCTGGCCTG GGGCATCCTG
AACGGCTTCT GGCTGGTGCT GCTGCGGCGC CCGGCGGTGT CGGGCGCCCT GGCGCTCACC
ATGGTCGTGG TGCTGGTGCT GCTGTCTCAG CTGAAGCACG CCGTGGTCCA GATGACCGCG
AACTTCGTCG ATGTGATGCT GATCGACCAC GACAGCGCGG CATTCCTGTT CACGATCTTT
CCGAACCTGA AGCTCTCGGT GCTGGTGGCG GCGGCCGTGG TGCTGCCGCT GATGGGCCTG
CTGTGGTGGG TCGATCCGTT CCGCGTCGCG CGGCTGCCGG CGCTGGCGGG CAAGCTCGCC
TGCCTCGCCG CGCTGACGCT TTATTCACTG AACTGGCGCG ACGAGGCTTG GCGCGGCTAT
TACGACGACG GCTATCTCTC CAAATTCGCG CGCTCCGGCG TGACCGCGGT CTCGGATTTC
CTCGCCAACG GCTTCATGGA ATCCGACGCC ACGGCCGATC GCCGGCTGGC GGCCGTGCTC
CCGGACTCCT GCCATCCGGC CGGACGGCGG CCGAACATCG TGCTGATCCA CGACGAATCG
AGCTTCGACA TCCGCTCCGC CCCCGGCATC AAGGTGCCCG AGGGTTATGG CAGCCATTTC
AAGTCCTATG ACGGCAAGGC GCGGCAGTTC ATGGCCGAGA GCAATGGCGG GCCGAGCTGG
TTCACCGAAT ACAATGTGCT CGCCGGCCTG TCGTCGCGCT CGTTCGGCCG CTTTGCCTAT
TTCGTCACCC GGATCGCCGC TGGCCGCGTC GAACGCGGAC TGCCCTGGGC GCTGCGGCAA
TGCGGCTATG ACACGGCCTC GATCTATCCC GCGCACGGCG CCTTCATGAG CGCGCGCAGC
TTCCAGACGA CAATGGGGAT CGAGCGCTTC CTCGACGCGC GCGACCTCGG CGCCAAAGGC
GTCGAGCCCG ACAGCTTCTT CTATGACGCG GCGCTCGATC TGATGCAGCA GCGGCAGCGG
ACCAAGCCGC TGTTCATGTT CGTCTATCTC GCCGCCAATC ATTTCCCCTG GGAGACCACG
TTCCGGCCGG ATCTGACGCC GGCCTGGCGC GCGCCCGGCA ATCTGCCGGC GATCGATGAG
TATCTGCGCC GGCAGGCGAT GAGTGCGTCG GATTATCAGC GCTTCGTGGC GAGCCTGAAG
AAGCGCTTCG GCGACCAGCC GTTCCTGATC GTGCGCTATG GCGATCACCA GCCGGAGTTC
TCGCCGCACA TTCTCGATCC CAAGCTCGAC GAGGCCGGCA TCGGCCAGAA GCTGGAAACC
TATGATCCGC GCTATTACGC GACCTATTAC GCTATCGACG GCGTCAATTT CGAGCCGCGC
CGGAGCGAAA TTGTGATGGA CAGGATCGAC GCGGCCTATT TGCCGCTGGT CACCCTGGAG
GCGGCCGGCA TTCCGCTCGA CCCGTCCTTC GCCGAGCAGA AGGACATCAT GCTGCGCTGC
AAAGGCGTGT TCTATGCCTG TGGCGAGGGC GCCGAGGCAC GCCGCTTCAA CCGGATGTTG
ATCGATGCCG AGCTGATCCG GGGCTTGTAG
 
Protein sequence
MSLTPNHEPI TTLAAASATR SAAVRLSAVA APHVAALALM LHTETDFGSR LGFVLAWGIL 
NGFWLVLLRR PAVSGALALT MVVVLVLLSQ LKHAVVQMTA NFVDVMLIDH DSAAFLFTIF
PNLKLSVLVA AAVVLPLMGL LWWVDPFRVA RLPALAGKLA CLAALTLYSL NWRDEAWRGY
YDDGYLSKFA RSGVTAVSDF LANGFMESDA TADRRLAAVL PDSCHPAGRR PNIVLIHDES
SFDIRSAPGI KVPEGYGSHF KSYDGKARQF MAESNGGPSW FTEYNVLAGL SSRSFGRFAY
FVTRIAAGRV ERGLPWALRQ CGYDTASIYP AHGAFMSARS FQTTMGIERF LDARDLGAKG
VEPDSFFYDA ALDLMQQRQR TKPLFMFVYL AANHFPWETT FRPDLTPAWR APGNLPAIDE
YLRRQAMSAS DYQRFVASLK KRFGDQPFLI VRYGDHQPEF SPHILDPKLD EAGIGQKLET
YDPRYYATYY AIDGVNFEPR RSEIVMDRID AAYLPLVTLE AAGIPLDPSF AEQKDIMLRC
KGVFYACGEG AEARRFNRML IDAELIRGL