| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5995 |
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| Symbol | |
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| ID | 5154187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6208432 |
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| End bp | 6209655 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640560718 |
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| Product | putative leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor |
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| Protein accession | YP_001241840 |
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| Protein GI | 148257255 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.524183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0200525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCA TATCGAAGTC CATGTCACGG CGCACCGTGC TCAAGAGCGG CGTCGCGCTC
ACCTCGATGC TGGCGGCGCC CGGTCTGCTC CGCGCCGAGC CGGCGCCGGT GAAGGTCGGG
CTGCTGCAGC CGATCTCCGG CGCCTTCGCG CTCGACGGCG ATCTCGCCAA GATCGGCGCC
GAATTCGCGA TCAAGGAGAT CAACGACGCC GGCGGCATCA AGGCGCTGGG CGGCGCCAAG
CTCGAACTGG TCGTCGGCGA CAGCCGCTCC AATGCCGAGG CCGGCGCGCA GGCCACCGAG
GAGCTGCAAT CGGCCGGCGT CGCTGCCGTG CTCGGCGGCT TTGCCTCAGG CATCGCGCTG
ACCGCGACGC AGACCGCCGC GCGCTACGAT CTGCCGTTCG TGGTCGATTG CGCGGTGGCC
GATACGATCA CCGAGCGCGG CCTCAAGAAC ACCTTCCGCT TCAATCCGAA CTTCAGCATG
GCCACCGCGG TCGCGCTGAA GAACCTCGTC AAGCTCAATG ACGACGCCGG CAAGCCGATC
AAGACGGTGG CGATCGTGCA TGAGGACGGC CTGTTCGGCT CGGGCCTTGC CAAGATCATG
CAGGAGAAGC TGCCGCCGCT CGGCTTCCAG ATCGTCGAGA CCATCGCCCA TCCGACGCCG
GCGCGCGACA TGACCAACGT TGTGCTGCGG CTGCGCGCGC TCAATCCCGA TCTGATCGTG
CCGTCGCATT ACTTCAACGA GTTTGTGCTG ATGGCCCGCA CCCTGCAACA GCAGCGTGTG
CGTCCGAAGG GGATCTACGC GGTGTTCGGC GGCGCTGCCT CCAGCTATCG CTTCGTCAAC
GAGTTCCCCG AGGCCGCCCA GGGCGTGATG GACTGCAACC ATTGGGGTGA TCCGAAGAGC
CCCATCACCG CGAAGCTGCG CGAGACCGTG ACCGCGGCCG GCAAGTTCTA CGCCTACAAC
ACGCCGATCA ACTACTCGTT GGTGAAGGTG TTTGCCCAGG CCGTCGAGAA GGCCGGCAGC
GCCGATCGCG CCAAGATCAT CGAGGCCCTG GCAGCGAACG AGTTCGACAG CGGCATCATG
CCCTACGGCA AGACCAAGTT CGACGCCAAG GGCCAGAATG CGAGTGCGTT GCCGCTGAAC
ACGCAGGTGC AGGGCAAGGA TATCAAGGTG ATCTACCCGG CCGAGTACGC TGAGGCCAAG
CCGGTGTTCC CGATCAACGG GTGA
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| Protein sequence | MTRISKSMSR RTVLKSGVAL TSMLAAPGLL RAEPAPVKVG LLQPISGAFA LDGDLAKIGA
EFAIKEINDA GGIKALGGAK LELVVGDSRS NAEAGAQATE ELQSAGVAAV LGGFASGIAL
TATQTAARYD LPFVVDCAVA DTITERGLKN TFRFNPNFSM ATAVALKNLV KLNDDAGKPI
KTVAIVHEDG LFGSGLAKIM QEKLPPLGFQ IVETIAHPTP ARDMTNVVLR LRALNPDLIV
PSHYFNEFVL MARTLQQQRV RPKGIYAVFG GAASSYRFVN EFPEAAQGVM DCNHWGDPKS
PITAKLRETV TAAGKFYAYN TPINYSLVKV FAQAVEKAGS ADRAKIIEAL AANEFDSGIM
PYGKTKFDAK GQNASALPLN TQVQGKDIKV IYPAEYAEAK PVFPING
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