| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5992 |
|---|
| Symbol | livG |
|---|
| ID | 5154283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 6205551 |
|---|
| End bp | 6206297 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640560715 |
|---|
| Product | branched chain amino acid ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_001241837 |
|---|
| Protein GI | 148257252 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.156334 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATGCTCG AGGTCAAGTC TCTCACCAAG CGCTTCTCGG GTCTCGTCGC CGTCGACCAG
GCGTCGCTGT CGGTCGCCAA GGGCTCGATC ACCGGCCTGA TCGGGCCGAA CGGCGCCGGC
AAGACGACGC TGTTTGCGAT GATCGCGGGC TTCCTGCAGC CCGACGGCGG CTCCGTCAGC
TATGAAGGAC GCGACATCAC CGCGCTCGCG CCGCACGTGC GCGCGCGCGC GGGCATCGCG
CGCACCTTCC AGATCGTGCA GCCGTTCGAA GGCCTGAACG TGCAGGAGAA CATCGCGGTT
GGCGCCTATC TGCACACGCC TGACGCCAGC GAGGCGATGC GGCAGGCTGC TGATATCGCC
AAGCGCGTCG GCCTTGGCGC TGATCTCACC AAGGGCTCGT CCGATCTCAC CGTCGCCGGC
CGCAAGCGGC TGGAGGTGGC GCGCGCGCTG GCGACGCAGC CGAAGCTGCT GCTGCTCGAC
GAGGTGCTGG CCGGCCTCAA CCCCTCGGAG ATTCGTGACG TGCTGCCGCT GGTGCGCGAC
ATCCGCGACC AGGGCGTCAC CATCCTGATG ATCGAGCACA TCATGCAGGC GGTGATGAAT
CTCTGCGATA CCGTGTATGT GCTGTCGCAA GGACGGATGA TCGCGCAGGG CGAGCCCAAG
ACGGTGTGCG AGGATCCGCA GGTGATCGAA GCCTATCTCG GCCATGGCGC CGCCGAGCGG
CTGCGCGCGG AGCAGGCCCA TGCTTGA
|
|---|
| Protein sequence | MMLEVKSLTK RFSGLVAVDQ ASLSVAKGSI TGLIGPNGAG KTTLFAMIAG FLQPDGGSVS
YEGRDITALA PHVRARAGIA RTFQIVQPFE GLNVQENIAV GAYLHTPDAS EAMRQAADIA
KRVGLGADLT KGSSDLTVAG RKRLEVARAL ATQPKLLLLD EVLAGLNPSE IRDVLPLVRD
IRDQGVTILM IEHIMQAVMN LCDTVYVLSQ GRMIAQGEPK TVCEDPQVIE AYLGHGAAER
LRAEQAHA
|
|---|
| |