Gene BBta_5991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5991 
Symbol 
ID5154282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6204857 
End bp6205558 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content65% 
IMG OID640560714 
Productbranched chain amino acid ABC tranpsorter ATP-binding protein 
Protein accessionYP_001241836 
Protein GI148257251 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.110822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAGG TCCGCGATCT CCGCGCCGGC TATGGCGGAA CGGAAGTGCT GCGTGGCGTC 
AGTCTCGACG TCAACGCGGG CGAGGTCGTC GCCGTGCTCG GCTCCAACGG CGTCGGCAAG
ACGACGTTGA ACAAGGTGCT GTCGGGCGTG GTGCCGGCGA CATCAGGCAC GATCCGTTTC
AACGGCGCGG CACTGGAGCA CGCCGCCGCG CCCGAGATCG TCACCGCCGG ACTGATCCAT
GTGCCTGAGG GGCGCAAGAT CTTCCCGAAT CTGTCGGTGC GCGAAAATCT CGAGCTCGGT
GCCTATTGCC GGCCGCGGCG CGGCCGCGCT GCAAAGGTCG ATCAGGTCTA TGAGATCTTT
CCGAAGCTGA AGCAGCGGGC GCGGCAATAT GCCGGCACGC TGTCCGGCGG CGAGCAGCAG
ATGCTGGCGA TCGGCCGCGG CCTGATGGGC GAGCCGAAGC TCTTGATCCT CGACGAGCCG
TCGCTCGGCC TGTCTCCGCT GATGGTGGAG GAGATGTTCG CGCTGATCGC GCGGCTCGCC
GCATCGGGCC TTGCCATCAT GCTGGTCGAG CAGAACGTCG TGCAGTCGCT CGAATTGGCC
GGCCGGGCCT ACATCATGGA GAACGGGTTC ATCACGCTCT CCGGCCAGGC CTCCGAACTG
AAATCGAATG CCGAGCTGAA GCGCGCTTAT CTCGGTCTGT GA
 
Protein sequence
MLEVRDLRAG YGGTEVLRGV SLDVNAGEVV AVLGSNGVGK TTLNKVLSGV VPATSGTIRF 
NGAALEHAAA PEIVTAGLIH VPEGRKIFPN LSVRENLELG AYCRPRRGRA AKVDQVYEIF
PKLKQRARQY AGTLSGGEQQ MLAIGRGLMG EPKLLILDEP SLGLSPLMVE EMFALIARLA
ASGLAIMLVE QNVVQSLELA GRAYIMENGF ITLSGQASEL KSNAELKRAY LGL