| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5987 |
|---|
| Symbol | |
|---|
| ID | 5154191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 6199543 |
|---|
| End bp | 6200157 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640560710 |
|---|
| Product | putative isochorismatase family protein |
|---|
| Protein accession | YP_001241832 |
|---|
| Protein GI | 148257247 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.104192 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATC ACCCCATCCC GGCCGCGCAG AGCGCGCTCT TGATCGTCGA TCTGCAGAAC
GACTTCCTCG ATCCCAAAGG CGCCTATGGC CGCGCCGGAC AGACGGCGGC TGATATCGCG
GCGCTGCCGC CACGGATCAA GCCGTTCGCC GATCTGATGC GGAGCAAAGG CGGCTTCGTC
ATCTCGACGC AGTTCACCCT GGTGCCGGGC AAGGGCGGCG AACCCCTGAT CTCGCCGCAT
CTGAAGCAGC TGCGGCCGTT CCTCGCCAAG GGCGATTTCC TGCCCGGCGC GTGGGGCCAT
CAACTGGTCG ACCTGCTGCA GCCGGCCGAC CTCACGATCG AGAAGATCGC CTATTCGGCG
TTCTACATGA CCCGGCTGGA ATGGGTGCTG CGCAAGTGCC GCATTGAAAA GCTCTACGTC
GCCGGTATCG TCACCAATGG CGGCGTCGCC TCGACGGTGC GTGATGCGCA TATCCGTGAC
GTCGAGACGG TGGTGCTGGA GGACGGCTGC GCGGCGTTCA CTGCGGAGAC GCATGCGACC
GCGATCGCGG CGTTGAGGCC TGTGTGCCGG GTGGCTTCGA TCGCGGAGGC CATGACGGAG
CTCGCGGCGT CATGA
|
|---|
| Protein sequence | MSDHPIPAAQ SALLIVDLQN DFLDPKGAYG RAGQTAADIA ALPPRIKPFA DLMRSKGGFV
ISTQFTLVPG KGGEPLISPH LKQLRPFLAK GDFLPGAWGH QLVDLLQPAD LTIEKIAYSA
FYMTRLEWVL RKCRIEKLYV AGIVTNGGVA STVRDAHIRD VETVVLEDGC AAFTAETHAT
AIAALRPVCR VASIAEAMTE LAAS
|
|---|
| |