Gene BBta_5965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5965 
Symbol 
ID5153600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6175388 
End bp6175726 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content61% 
IMG OID640560688 
Productputative cytochrome c like protein 
Protein accessionYP_001241810 
Protein GI148257225 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.672072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATGA GAACGGCGGC GGCCTTCGCC GCCGTCGTGG CGACCTCGAG CATCCTCTCG 
ACCGCCGCCT TCGCCCAACA GGATGAGACT GCTGCACACG GCCAAGTGGA TCTCGGCAAG
ACGACATTCG CGCAGAAATG TTCGCATTGC CATGGCCCGA ACATGGTGAA CTCCGGCACG
GTCACACCGG ACTTGCGCCG GTTTCCTGAC GACCAGCCAC GCTTCGTGAC CACCGTGAAG
CAAGGCAAGA ACGGCCGCAT GCCGCCATGG GGTGACATTC TCAGCGATGA TGAGATCACC
GCTCTGTGGG CCTATGTTTC GAGCCGGAGA GCGCAATGA
 
Protein sequence
MFMRTAAAFA AVVATSSILS TAAFAQQDET AAHGQVDLGK TTFAQKCSHC HGPNMVNSGT 
VTPDLRRFPD DQPRFVTTVK QGKNGRMPPW GDILSDDEIT ALWAYVSSRR AQ