Gene BBta_5952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5952 
Symbol 
ID5153587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6166455 
End bp6167381 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content66% 
IMG OID640560675 
Productputative metallo-beta-lactamase family protein 
Protein accessionYP_001241797 
Protein GI148257212 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.229311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCAAT GGATCATCGC CATCATCATG GCGTGGGGCG CCGTTGCGCT CGGCGACGTC 
GCGCAGGCCG AGACACGGGA GCTTCCTGTC GAGGAGATCG CGTCCGGGGT GTTCGTCCAT
ATCGGACAGA CCGCGTTGAT GACCGCGGAG AACGAAGGTG CCATCGCGAA TGTCGGATTT
GTCATCGGCA GCGATGCCGT TGCGGTGATC GATACCGGCG GCAGCGTCCG CGAGGGACGC
GCTTTGCTGG CGGCGATCCG CGCCCGCAGC AGCAAGCCGA TCCGCTACGT CATCAACACC
CACGCCCATC CCGACCACAT CTTCGGCAAT GCCGCGTTCC AGGTGGACGA CGCCCGCTTC
GTCGGCGCGA AGAACCTGTC CCGGGCGATC GCCGTGCGCG GGCCGCATTA CATCGAGGCC
TTTCGTCGCT TGATGGGCGC CGAACTCATC GACGAGGTCC GCCTGGTGTC GCCATCGCTT
GTCGTCGAGG ATCACCTGTC GCTCGATCTG GGCGGGAGGA CTCTGACCTT GAAGGCCTGG
AGTACCGCTC ATAGCGACTG CGACCTGACC GTCACCGACG ACCAGAGCGG GACGTTGTTT
GCTGGGGACC TGGTTTTCCT GCGTCACATC CCCGTGATGG ACGGCAGTCT GCGCGGCTGG
ATCGCGGATA TCGCGGCCCT GGCGACCATC ACCGCCGCGC GCGTGGTACC CGGCCACGGG
CCGGTCAGCC CATGGCCGCT GGCACTCACC GACGAACGCC GCTACCTCGA CACATTGGCC
CATGACGTTC GTGGGCTGAT CAAGGCGGGC AAGCCGATCG CCGAGGCCGC AGGCGCCGCC
GGATCGGAAC GCGGCAAATG GGAGCTGTTC GACGACTACA ATGCCCGCAA TGCCACCGCG
GCGTTCTCGG AAATGGAATG GGAATGA
 
Protein sequence
MTQWIIAIIM AWGAVALGDV AQAETRELPV EEIASGVFVH IGQTALMTAE NEGAIANVGF 
VIGSDAVAVI DTGGSVREGR ALLAAIRARS SKPIRYVINT HAHPDHIFGN AAFQVDDARF
VGAKNLSRAI AVRGPHYIEA FRRLMGAELI DEVRLVSPSL VVEDHLSLDL GGRTLTLKAW
STAHSDCDLT VTDDQSGTLF AGDLVFLRHI PVMDGSLRGW IADIAALATI TAARVVPGHG
PVSPWPLALT DERRYLDTLA HDVRGLIKAG KPIAEAAGAA GSERGKWELF DDYNARNATA
AFSEMEWE