Gene BBta_5908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5908 
Symbol 
ID5152396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6128742 
End bp6129032 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content64% 
IMG OID640560634 
Productputative nifU protein 
Protein accessionYP_001241756 
Protein GI148257171 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0694] Thioredoxin-like proteins and domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.674127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTTG AAACCCAGGG CATCGTCGAA GCGCCGGCTC AGATGAGCGA GCGTGAGCGG 
ATCATCCGGG CCGTGATCGA GGAGGTCCGT CCGAACCTCA AGCGCGACGG CGGTGATTGC
GAACTTGTCG AGATCGACGG CAACAAGATC ATGGTCAAGC TCGCCGGCGC CTGCATCTTC
TGCAAGCTCG CCAGCGCGAC CCTGGAAGGC ATCCAGGCCC GCATGATCGA GAAGCTCGGC
GAGTTCGTCC GTCTCGTTCC CGTGGCCGGC GCAGCCAAGG CGCGGCATTA A
 
Protein sequence
MLVETQGIVE APAQMSERER IIRAVIEEVR PNLKRDGGDC ELVEIDGNKI MVKLAGACIF 
CKLASATLEG IQARMIEKLG EFVRLVPVAG AAKARH