Gene BBta_5900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5900 
Symbol 
ID5151513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6122680 
End bp6123453 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content67% 
IMG OID640560626 
Producthypothetical protein 
Protein accessionYP_001241748 
Protein GI148257163 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0217086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACG ACATCGACGA GGCCATCGAC TGGCAGGGCC ACGAGATCAG CTGCGCCGGC 
TGCGCCCACG AGCAGCTCAG CGCCGCCGGC GGCTGCCGGC TTCGGCACGC CTGCGTGCAT
GACCGCTATG CCCGGCGCAT CGACCGCTTC TTCAACTGGA ATCCGGCGCT TGCCAACGAC
TATGTCAAGC ACCCGCATTT CGAGGTGCGT GCGATCGCGG CCAAGCATGC CAGCCCGTTC
TACCTGCCGC CGCTGCTCGA CGATCCCGAG GAAACCGTGC GTTGGAACGC GGCACGGCGG
CTGCCGAAGC GGCTGGTGCT GCGGCTGCGC CACGATCCGC ATCGGGAGGT CCGCATCCGC
ATCGCCACCG TGCTCGATCC GGAAGACCTG ATGCCGATGA TGATGGACGA CGACTATTAC
GTCCGTCTCG TCGTTGCGCG CCGCATCGTG CCGTCGGTGC TCGGCCGCAT GATGGGTGAC
CCCGAGGCCG AGGTCCGCCG CGTCGTCGCG CGGCGGATCC CGAGCGATTG GCTTCTCGGC
ATGATCAGCG ATCCCGATGC CCGCGTGCGG CTTGAAATCG CCGAGCGCCT GGCGCCCGAT
CTTCTCACCG CGATGCGCAA GGACTCCGAT TGGCGGGTCC GCCATGAAGT CGCGAGCCGG
ATCGCGCTCA GCGAGCTCCA TGAACTGGCG GAAGACGAGG ATCCGCTGGT GCGGGAGATG
GCGCGAGGCC GACTCGATAA CCGTTCTGGA GCAGCGATGG AGAAACCGGC ATGA
 
Protein sequence
MSDDIDEAID WQGHEISCAG CAHEQLSAAG GCRLRHACVH DRYARRIDRF FNWNPALAND 
YVKHPHFEVR AIAAKHASPF YLPPLLDDPE ETVRWNAARR LPKRLVLRLR HDPHREVRIR
IATVLDPEDL MPMMMDDDYY VRLVVARRIV PSVLGRMMGD PEAEVRRVVA RRIPSDWLLG
MISDPDARVR LEIAERLAPD LLTAMRKDSD WRVRHEVASR IALSELHELA EDEDPLVREM
ARGRLDNRSG AAMEKPA