Gene BBta_5822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5822 
Symbol 
ID5150557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6067078 
End bp6067833 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content61% 
IMG OID640560550 
Producthypothetical protein 
Protein accessionYP_001241672 
Protein GI148257087 
COG category[S] Function unknown 
COG ID[COG3403] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.464349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.356992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGTT TGTTTTTAAG GAAGGACGAG GTTCGAGCCA GCTATCGCGT CAGCAGCTGG 
CAGAGCGTCC TGTTTTCGGA GTTCGAAGCT CAAATGAGCA GCGATGCTCG CCCTTTTCCC
TGCATCTTTG GCGTGGCCGG CTATCGGCAG GATCAGCTTC GCTATCTGTT TCTCGATCCT
CTCGACACGG ACGCTCTCGG CAAGCAGCTC GCACTGTTCG TATCGGAATC TCGTTCGCAC
GGACCCAACA CCTCGCTCGT TCTGTTCACG CGGCCTCGAC CGGTTCAAAC GCTCGACGCC
TACTACAAGA AGTTCTGGCG CATCCTCGAT CAACTCGCGC GCATCGACAA ACAACCGTGG
CCGGCACACA TCCCGCAGAC CATCGACGAT CCGATGTGGG AGTTCTCGTT TGCCGGGGAG
CCGATCTTCG TTGTCTGCAG CACGCCGGCG CATGTGATGC GGCAGAGCCG GCGCTCGAGC
GCCTTCATGC TCACGTTCCA GCCACGCTGG GTGTTCGAAA AGATCCTCGG CACCGATCGG
GCTGCAGCGA AGGCGTTTGG CGAAGTGCGC AAGCGGCTCG CGCCGTTCGA CACGACGACA
GCATCACCGC TGCTGGGGCG CTACGGCGAT CCGGAAGGCC GGGAATACAA GCAGTACTTC
CTCTACGACG ACAACGAACC GCCGCCAGCC TGTCCCTTCC ACAGGCTCGC GCAAACCAAG
CTGCCTTCGG TCGAAGACAA GGAGCAGGCC GCATGA
 
Protein sequence
MSRLFLRKDE VRASYRVSSW QSVLFSEFEA QMSSDARPFP CIFGVAGYRQ DQLRYLFLDP 
LDTDALGKQL ALFVSESRSH GPNTSLVLFT RPRPVQTLDA YYKKFWRILD QLARIDKQPW
PAHIPQTIDD PMWEFSFAGE PIFVVCSTPA HVMRQSRRSS AFMLTFQPRW VFEKILGTDR
AAAKAFGEVR KRLAPFDTTT ASPLLGRYGD PEGREYKQYF LYDDNEPPPA CPFHRLAQTK
LPSVEDKEQA A