Gene BBta_5692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5692 
Symbol 
ID5149381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5940589 
End bp5941320 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content67% 
IMG OID640560429 
Productputative alanyl-tRNA synthetase related protein 
Protein accessionYP_001241551 
Protein GI148256966 
COG category[R] General function prediction only 
COG ID[COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0809019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.409896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACT TTCTTCCGCG CCCCTTCTCC GTCGACCATC CCGAGGTCCT GGCGCTCGAC 
GTCGCGACGC TGGACGCGCG CCCCGGCGCC GTGCTGCTGG CGCGGTCACC ATTCTATCCG
GGCGGCGGTG GCCAATTGCC GGACCGCGGC ACGATCGCCT GGAATGGCAT CGTGCGCGAA
GTGGTGGGCT TCGAGGTGAC GGCTGACGGC CTCTGGCACC TGATCGGGGA CGACGCCATT
CCCGACGGGA TGATCGAGCT GCGCGTCGAC CAAGCCTTCC GCCAGCGGAT GTGCGAACAG
CACACGGTGG CGCATCTCGT CAATAGCGCC GTCTACACGC TGTTCGACGG CGCATTGCTA
ACCGGCGTCC GCATGACCGA AACCGACGAA TTCAGCGTCG ACTTCGATCT GCCGAAGGTG
GCGCCAGAGC AGCTGCGCGC CGTCCAGGAT GCCGTCAACA CCGCAATCGC CGACGATCGT
CCGGTGCGCA CCTTCGACAT GGATTACGAC ACTGCACAGA CCACCGCCGG CCTGTTCCGC
GCCAAATCCG TCGCCCCGCC GCGCCAAGCC GACGGCCTGA TCCGCATCGT CGACATCGAC
GGTCTCGACC GCCAGGCCTG CGGCGGCACG CACCTGGCGT CGACCGCGCG GGCGCGGCGG
ATTCGCATTC TGAAGGTCGA CAACAAGGGC CGGCAGAACC GGCGGCTTCG AATCGGGATG
CTGGGCGCGT AG
 
Protein sequence
MTDFLPRPFS VDHPEVLALD VATLDARPGA VLLARSPFYP GGGGQLPDRG TIAWNGIVRE 
VVGFEVTADG LWHLIGDDAI PDGMIELRVD QAFRQRMCEQ HTVAHLVNSA VYTLFDGALL
TGVRMTETDE FSVDFDLPKV APEQLRAVQD AVNTAIADDR PVRTFDMDYD TAQTTAGLFR
AKSVAPPRQA DGLIRIVDID GLDRQACGGT HLASTARARR IRILKVDNKG RQNRRLRIGM
LGA