Gene BBta_5616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5616 
Symbol 
ID5154895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5847381 
End bp5848091 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content69% 
IMG OID640560358 
Producthypothetical protein 
Protein accessionYP_001241480 
Protein GI148256895 
COG category[S] Function unknown 
COG ID[COG5429] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.339689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCGAA GCCTCGTCTC GTTCCGCCAC ATCGCTCACC TCGCCGTGAT GCTGGCGGCT 
TTTGCCCCTT GGGCGCCCTC GGCCGCAGCC GTGGACCGGC CCGTGGTGAT CGAACTCTTC
ACCTCGCAAG GCTGCTCCTC CTGCCCGCCG GCGAATGCCT ATCTCAACGA GATGGTGCGG
CAGCGACGCG ACGTGCTGCC GCTCGCCTTT CACGTCACTT ATTGGGATCG GCTCGGCTGG
AAGGATCCAT TCTCGCTTGC AGCCGCCACC GATCGCCAGG CCCGCTATGG CAGCCGTTTC
GGCGACGGCT CCTACACGCC AGAGATCGTC GTCGACGGCC TCAGCAGCCA TGTCGGCTCC
AACAGGGCCG AGATCGGACC GGCGATCGAC CGCGCACGCG GCCAAGCGTC CTCCGCGGCC
ATCGTCAAGC TCGCGCGCAG CGGCGAGACG CTCACGGTGG AGGTCGGCGG CGGAGAAGGA
CGCGGACGCG TCGTGCTGGT CGGATTCGAT CACCGGCATG AGACGGCGAT CCGGCGCGGA
GAGAATGACG GCCGCACGCT CGAGGAGCTG AACGTGGTCC GCTCGGTCCG CGCCCTCGGC
GAGTGGACCG GCACCGCGCT GCGTCTCGTC GCGCCACTGC CGGAGGGCGA GGATGCGGCC
GTGCTTCTCG AAACCGCAGA CGGACGCATC GTCGGGGCCG CGCGGCTGTG A
 
Protein sequence
MVRSLVSFRH IAHLAVMLAA FAPWAPSAAA VDRPVVIELF TSQGCSSCPP ANAYLNEMVR 
QRRDVLPLAF HVTYWDRLGW KDPFSLAAAT DRQARYGSRF GDGSYTPEIV VDGLSSHVGS
NRAEIGPAID RARGQASSAA IVKLARSGET LTVEVGGGEG RGRVVLVGFD HRHETAIRRG
ENDGRTLEEL NVVRSVRALG EWTGTALRLV APLPEGEDAA VLLETADGRI VGAARL