Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5616 |
Symbol | |
ID | 5154895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 5847381 |
End bp | 5848091 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640560358 |
Product | hypothetical protein |
Protein accession | YP_001241480 |
Protein GI | 148256895 |
COG category | [S] Function unknown |
COG ID | [COG5429] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.339689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCGAA GCCTCGTCTC GTTCCGCCAC ATCGCTCACC TCGCCGTGAT GCTGGCGGCT TTTGCCCCTT GGGCGCCCTC GGCCGCAGCC GTGGACCGGC CCGTGGTGAT CGAACTCTTC ACCTCGCAAG GCTGCTCCTC CTGCCCGCCG GCGAATGCCT ATCTCAACGA GATGGTGCGG CAGCGACGCG ACGTGCTGCC GCTCGCCTTT CACGTCACTT ATTGGGATCG GCTCGGCTGG AAGGATCCAT TCTCGCTTGC AGCCGCCACC GATCGCCAGG CCCGCTATGG CAGCCGTTTC GGCGACGGCT CCTACACGCC AGAGATCGTC GTCGACGGCC TCAGCAGCCA TGTCGGCTCC AACAGGGCCG AGATCGGACC GGCGATCGAC CGCGCACGCG GCCAAGCGTC CTCCGCGGCC ATCGTCAAGC TCGCGCGCAG CGGCGAGACG CTCACGGTGG AGGTCGGCGG CGGAGAAGGA CGCGGACGCG TCGTGCTGGT CGGATTCGAT CACCGGCATG AGACGGCGAT CCGGCGCGGA GAGAATGACG GCCGCACGCT CGAGGAGCTG AACGTGGTCC GCTCGGTCCG CGCCCTCGGC GAGTGGACCG GCACCGCGCT GCGTCTCGTC GCGCCACTGC CGGAGGGCGA GGATGCGGCC GTGCTTCTCG AAACCGCAGA CGGACGCATC GTCGGGGCCG CGCGGCTGTG A
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Protein sequence | MVRSLVSFRH IAHLAVMLAA FAPWAPSAAA VDRPVVIELF TSQGCSSCPP ANAYLNEMVR QRRDVLPLAF HVTYWDRLGW KDPFSLAAAT DRQARYGSRF GDGSYTPEIV VDGLSSHVGS NRAEIGPAID RARGQASSAA IVKLARSGET LTVEVGGGEG RGRVVLVGFD HRHETAIRRG ENDGRTLEEL NVVRSVRALG EWTGTALRLV APLPEGEDAA VLLETADGRI VGAARL
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