Gene BBta_5608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5608 
Symbol 
ID5155511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5836191 
End bp5837156 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content66% 
IMG OID640560351 
Productnuclear export factor GLE1 domain-containing protein 
Protein accessionYP_001241473 
Protein GI148256888 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria
[COG4549] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.514484 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGCGA TGCTGGTTGG TCTCATGGCC TTGTCGGCTG CCGTGTGCGG AGCCGCGGCG 
CATGCCCATG TCGTGCTCGA CAAATCGGAG GCGCGGATCG GCAAGTCGTT CAAGGCGGTT
CTGGCCGTCC CTCATGGCTG TGACGGGTCC GCGTCGGTGC GGCTGACCGT GCAGGTGCCG
GAGGGCATGA TTGCGGTGAA GCCGATGCCG AAGCCGGGCT GGTCCATCGA CATCAAGAAG
GGCGCGTATG CGCGCGCCTA CAATTTCATG CATGGCGCGC AGCTCGGCGA AGGCGTCAAG
GAGATCAGCT GGAGCGGCCG CCTGGAGGAT GGCTTCTATG ACGAGTTCAC CTTCACCGGC
TATATCGCCG ATGCGTTCAA GCCCGGCGAT ACGATGGCCT TTCCCGTGGT CCAGGAGTGC
GAGACAGGCG TGGCCAAATG GGTCGAGACG GCTGCCGCCG GACAGGACCC GCATACGCTC
AAATATCCGG CGCCGTTGCT GCGTCTCACT GCGGCCGATG CGCCGCGCGG CGTGTCAAAG
GGCGACATCA CCGTGTCCTC GGGCTGGAGC CGCGCCACGC CGGCGGGCGC CAAGGTCGGC
GCCGGCTATT TCGCCATGAC GAATACCGGG CGTGAGCCGG ACCGCCTGGT TGCGGCCAGC
AGCGATTTGG CCGAGACGGT CGAGATCCAC GAGATGTCGA CGCGCGACGG CGTCATGGTG
ATGCGGCCGC TCGATCAGGG GCTGACGATA TCAGCGGGAC AGACTGTCGC GTTGACGTCG
GGCGGCATGC ATCTGATGCT CACCGGCCTC AAGACGCCGC TCGTCGAGGG CAAAACAGTG
GCCGTGACGT TGCAATTCGA GCGGGCCGGC AAAATGGCCG TGCTGCTCGA CGTGCTCGCG
GTCGGCGCGC AGGGACCGGG TGGTCAGCAG GGCATGGCCG GCAAGGCGGA ACATGCGCAG
CATTGA
 
Protein sequence
MKAMLVGLMA LSAAVCGAAA HAHVVLDKSE ARIGKSFKAV LAVPHGCDGS ASVRLTVQVP 
EGMIAVKPMP KPGWSIDIKK GAYARAYNFM HGAQLGEGVK EISWSGRLED GFYDEFTFTG
YIADAFKPGD TMAFPVVQEC ETGVAKWVET AAAGQDPHTL KYPAPLLRLT AADAPRGVSK
GDITVSSGWS RATPAGAKVG AGYFAMTNTG REPDRLVAAS SDLAETVEIH EMSTRDGVMV
MRPLDQGLTI SAGQTVALTS GGMHLMLTGL KTPLVEGKTV AVTLQFERAG KMAVLLDVLA
VGAQGPGGQQ GMAGKAEHAQ H