| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5589 |
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| Symbol | |
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| ID | 5153978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5815107 |
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| End bp | 5816147 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640560332 |
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| Product | HlyD family multidrug resistance protein protein |
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| Protein accession | YP_001241454 |
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| Protein GI | 148256869 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.346185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGG CGCTCGGGCT CGTTCTGCTA CTGGCCGCGG CGGCTGGAGG TTATGTCTAT
TACGACGCGG CTCGCCGTTT CGAGAGCACC GATGACGCCT TCATCGCGGC CCGCCAGTTC
TCGATCGCCC CGAAGGTGTC CGGCTACATC ACCTCCGTTC CGGTCACCGA CAACCAGCAC
GTCAGGGCTG GCGACGTGAT CGCGCGCATC GATGAGCGAG ACTACCGAAC CGCGCTGGCT
CAGGCCGAGG CGCAGGTGAG GTCGGCGGAG GCGGCGATCC ACAACATCGA CGCCCAGATC
GCGGTTCAGC AGGCGCAGAT CAGGGCGGGG CAGGCCCAGG TGGAGCAGGC CCAGGCGGCC
CTGACCTTCG CCGAGCAGCA GGCCAAGCGT TATCAGGACC TCGCCCGCAC CGGCTCCGGC
ACGGTGCAGA GCGAGCAGCA ATATACGTCG CAGCTCGAGC AGCAGAAGGC GGCGCTGACG
TCTGCGCAGG CCAACCTGCA GGTTGCGCAG CGGCAGCTCG AGTCTCTGAA TGCTCAGCGC
GAGAGCGCCG ACGCCAATCT CGCGCAGGTG CAGGCGCAGC GCGACCAGGC GCAGCTCAAT
TTGTCCTACA CCACCGTCAC CGCCGCGCAG CCGGGCCGAA TCGTCAATCT CAGCGCCGCC
GACGGCCAGT TCGCCGCCCA AGGCACGGCG CTCTCGATGT TCGTGCCCGA CGACGTCTGG
GTCACCGCCA ATTTCAAGGA GACACAGCTT GACCAGATGC GTCCCGGTCA GCCGGTGACG
TTGCAGATTG ACGCCTATCC GGAGCGCGAG ATCCGCGGCC ATGTCGCCAG CGTGCAGTCC
GGCTCGGGCC CCGCGTTCTC GCTGCTGCCG CCGCAGAACG CGACCGGCAA TTACGTCAAG
ATCGTCCAGC GCGTCCCGGT CAAGATCGAG ATGGACGATC CGCCGGCGGA CGTCGCGCTT
GGGCCGGGCA TGTCGGTCGT TCCCACCGTG CGCGTCAATC CCAAGCCGTC GCTGTATGAG
CGGCTGAGGG CCTCGCTATG A
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| Protein sequence | MSAALGLVLL LAAAAGGYVY YDAARRFEST DDAFIAARQF SIAPKVSGYI TSVPVTDNQH
VRAGDVIARI DERDYRTALA QAEAQVRSAE AAIHNIDAQI AVQQAQIRAG QAQVEQAQAA
LTFAEQQAKR YQDLARTGSG TVQSEQQYTS QLEQQKAALT SAQANLQVAQ RQLESLNAQR
ESADANLAQV QAQRDQAQLN LSYTTVTAAQ PGRIVNLSAA DGQFAAQGTA LSMFVPDDVW
VTANFKETQL DQMRPGQPVT LQIDAYPERE IRGHVASVQS GSGPAFSLLP PQNATGNYVK
IVQRVPVKIE MDDPPADVAL GPGMSVVPTV RVNPKPSLYE RLRASL
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