Gene BBta_5582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5582 
Symbol 
ID5154094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5807114 
End bp5807770 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content67% 
IMG OID640560325 
ProductTetR family transcriptional regulator 
Protein accessionYP_001241447 
Protein GI148256862 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.431544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTTC CCAAGACGGC GCGTGGCAAG GTCGGGCGGC CGCCGCTCGA ACGGGCTGGC 
GAGGTCGAGG AGCGCATTCT CGATGCCGCC AAGACGGTGT TCCTGGCCCA TGGCTTCGAA
GGGGCGAGCG TCGACGTGAT CGCGCAGACC GCCCGCGCCG GAAAGCCCAC GATCTATGCG
CGCTTCCCCA GCAAGGCGGC GCTGTTCGCG GCGGTCATCG GCCGTCAGGC CGCGAACAAC
ACACAATATG AGAATCTGGT GCCGCAGGGC CGCACCTTCC GCGCGCGGCT CGTCAACCTC
GCTGTGACGC TGATCGAACG CGCCTTTGCG GACGAGACGA TCGGCCTGAT GCGCACGGCC
ATTGCCGAGA GTCCGCGCTT TCCCGACCTC ACGCTGGAAG TCCAGGATTC GGCGCGCCAG
CGCGCCACGC GCAATGTCGG CCATGTCATC GCCGAGTTGG CGCGGGCAGA GGGGCTGTAC
GGCAGGGGCG CGTTCGCGGC GGAGCGGATC GAGGAGACCG CAAGGATCTT CATCGACCTC
GCAGTCTTCT CCATGCTGTT TCGCGCCCTG CTCGGTGAGG ACGTGCGCGC GCTGAAGAAG
GAAGCGCAGA CCTATGTCGA AGAGCGCGTC GACTTCTTCC TGGCCGCATC AACGTGA
 
Protein sequence
MAVPKTARGK VGRPPLERAG EVEERILDAA KTVFLAHGFE GASVDVIAQT ARAGKPTIYA 
RFPSKAALFA AVIGRQAANN TQYENLVPQG RTFRARLVNL AVTLIERAFA DETIGLMRTA
IAESPRFPDL TLEVQDSARQ RATRNVGHVI AELARAEGLY GRGAFAAERI EETARIFIDL
AVFSMLFRAL LGEDVRALKK EAQTYVEERV DFFLAAST