| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5555 |
|---|
| Symbol | |
|---|
| ID | 5153019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 5778653 |
|---|
| End bp | 5779531 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640560298 |
|---|
| Product | ABC transporter periplasmic-binding protein |
|---|
| Protein accession | YP_001241420 |
|---|
| Protein GI | 148256835 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.99193 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.689785 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACGC GGGCGAATTA CGTCCTGATC GGTTCATTCA CGCTGGCGGT GATCGCTGCG
GCGGTCGGGT TCGTCCTCTG GTTCCAGAGC CTGCATACGA CCAAGCAGCG CAGTCCCTTG
CGGGTGGTGT TCGAAGGCCC GGCCGCCGGC CTGCGCAATG GCGGCAGCGT CAATTTCAAC
GGTATCCGGG TCGGCGAGGT GATCTCGGTC AAGCTCGACA ATCCGCGCCG CGTGGTGGCG
CTGGCGATGG TTGAGAACAA TGCGCCCATC CGCAAGGACA CGCTCGTCGG GCTTGAGTTC
CAGGGTCTGA CCGGAGTCGC CGCGATCGCG CTCAAGGGTG GGGAGGAGGC GGCACCGCCG
CCGCCCCTGG ATGAAGACGG TGTGCCGGTG CTGCGCGCCG ACCCGACCCG GCTACAGGAT
GTGACCGAAG CGATCCGCGC CACGCTGCAG AACATCAACA AGGTGGTGGC TGACAACCAG
GATGCTGTGA AGAACTCGAT CAAGAATCTC GAGGTCTTCA CCCAGTCGCT GGCGCGCAAT
TCCGAACGCA TCGACGGCGT CATGAGCCGG GTCGACGGCA TCATGGGCAA GGCCGATACG
TTGATGCTCG GGCTCAATTC GCTGGCCGGC GGCAAGGATG GCGGCGAGTT GTTCCTGACA
GTGAAGTCGA TCCGCGAGCT CGCCGAAGAT TTCGACAAGC GCTCCGGCGC GCTGATGGCT
GACGGGCGGC GGACCTTGTC CGACATCAGC CGGGCCGTGA ACAATTTCGA CCGCAACCCG
ACCCGCGTCC TGTTCGGCGC CAGCAATTCA AGTCCGAGCA ATGCCCAGGC CTCGCAGCCC
GCACCGGCGC CCGCGCCGCC GGCCAGCAGC AGGCGATGA
|
|---|
| Protein sequence | METRANYVLI GSFTLAVIAA AVGFVLWFQS LHTTKQRSPL RVVFEGPAAG LRNGGSVNFN
GIRVGEVISV KLDNPRRVVA LAMVENNAPI RKDTLVGLEF QGLTGVAAIA LKGGEEAAPP
PPLDEDGVPV LRADPTRLQD VTEAIRATLQ NINKVVADNQ DAVKNSIKNL EVFTQSLARN
SERIDGVMSR VDGIMGKADT LMLGLNSLAG GKDGGELFLT VKSIRELAED FDKRSGALMA
DGRRTLSDIS RAVNNFDRNP TRVLFGASNS SPSNAQASQP APAPAPPASS RR
|
|---|
| |