Gene BBta_5516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5516 
SymboldksA 
ID5152308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5735234 
End bp5735635 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content60% 
IMG OID640560261 
ProductDnaK suppressor protein 
Protein accessionYP_001241383 
Protein GI148256798 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02420] RNA polymerase-binding protein DksA 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.596714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGAACT ACAAACCTTC CGAAAAAGAG CCTTTCATGA ACGAACGCCA GCGCGAGTAT 
TTTCGCGCCA AGCTGCTGGC ATGGAAGGAG GAGATCCTGC GCGAATCGAA GCTCACCCTG
CAGGCTCTGC AGGAGGAGAA CGTGAACCAT CCCGACCTCG CCGATCGTGC GTCGTCGGAG
ACGGACCGGG CGATCGAGCT TCGCGCCCGT GATCGCCAGC GCAAGCTGAT CTCCAAGATC
GACGCTGCGC TTCAGCGCAT CGAAGACAAT ACCTATGGCT ATTGCGAGGA AACCGGCGAG
CCGATTTCGC TCAAGCGGCT CGAAGCCCGG CCCATCGCAA CGCTGTCGGT CGAGGCGCAG
GAGCGCCACG AGAAGCGCGA AAAGGTCTAT CGCGACGAGT AA
 
Protein sequence
MKNYKPSEKE PFMNERQREY FRAKLLAWKE EILRESKLTL QALQEENVNH PDLADRASSE 
TDRAIELRAR DRQRKLISKI DAALQRIEDN TYGYCEETGE PISLKRLEAR PIATLSVEAQ
ERHEKREKVY RDE